Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DUXAP11-201ENST00000603858 526 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13CQ709C8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13CQ709C8 SNORA62.2-201ENST00000364672 152 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 AP004247.1-201ENST00000531556 1289 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AC025263.3-201ENST00000622965 1396 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 RPS15AP34-201ENST00000487776 387 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC010265.1-201ENST00000513509 211 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC103833.1-201ENST00000517442 172 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 AL161713.1-201ENST00000555538 145 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 MTND4LP5-201ENST00000605152 292 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC009229.3-201ENST00000608056 282 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VPS13CQ709C8 CFTRP1-201ENST00000456646 183 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC089999.1-201ENST00000460336 374 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC090517.3-201ENST00000625170 141 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
VPS13CQ709C8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 MIR365B-201ENST00000362317 111 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 RNU6-105P-201ENST00000363909 104 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 SUMO2P12-201ENST00000405924 140 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 SNRPEP10-201ENST00000420249 274 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS13CQ709C8 MIR4295-201ENST00000585286 85 ntBASIC0.91□□□□□ -2.26
VPS13CQ709C8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.9□□□□□ -2.26
VPS13CQ709C8 RNF6P1-201ENST00000444889 1784 ntBASIC0.9□□□□□ -2.26
VPS13CQ709C8 RNU2-22P-201ENST00000411266 212 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 UBE2V1P13-201ENST00000436983 439 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 RNA5SP82-201ENST00000516707 92 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 AC016769.3-201ENST00000396562 315 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 AC017076.1-201ENST00000607613 578 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 CUL4AP1-201ENST00000514750 1863 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 XIAPP3-201ENST00000312918 795 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 OR1L1-202ENST00000373686 1083 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 AP000949.1-201ENST00000438328 629 ntBASIC0.9□□□□□ -2.27
VPS13CQ709C8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
VPS13CQ709C8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 OR51A5P-201ENST00000415429 942 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 AL121601.2-201ENST00000438019 707 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC114786.4-201ENST00000508771 728 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC114797.1-201ENST00000514003 728 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC092140.2-201ENST00000618027 521 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC004022.1-201ENST00000447766 1066 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 AL353718.1-201ENST00000451028 517 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS13CQ709C8 CBX3P7-201ENST00000532876 502 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.89□□□□□ -2.27
VPS13CQ709C8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VPS13CQ709C8 RNU6-222P-201ENST00000362438 107 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 Y_RNA.390-201ENST00000383932 102 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC073264.1-201ENST00000411508 416 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC074117.2-201ENST00000417130 397 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 USP9YP7-201ENST00000436723 430 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 USP9YP32-201ENST00000452432 430 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC093281.2-201ENST00000510153 597 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 MIR4711-201ENST00000578274 70 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 SEPT7P9-203ENST00000604116 343 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AL135786.2-201ENST00000608422 615 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AP001005.3-201ENST00000622049 129 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC234064.1-201ENST00000436312 247 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 DPPA3P1-201ENST00000448050 469 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC107918.3-201ENST00000533272 382 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 MIR5694-201ENST00000581190 76 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 RPL23AP88-201ENST00000605759 454 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms