Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RPS29P15-201ENST00000458329 171 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 GMFBP1-201ENST00000467831 427 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC092989.1-201ENST00000481235 277 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RNA5SP291-201ENST00000517222 105 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 IGLVIV-65-201ENST00000517313 360 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 RANP9-201ENST00000519957 271 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC103843.2-201ENST00000530523 682 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ADI1P3-201ENST00000549509 470 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC012417.1-201ENST00000582307 1039 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC008752.3-201ENST00000588113 712 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL109618.2-201ENST00000605527 211 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC130324.3-201ENST00000614165 542 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL359547.2-201ENST00000615810 418 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC011155.2-201ENST00000623202 216 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL773545.4-201ENST00000637262 310 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC008013.2-202ENST00000637965 364 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AL513478.4-201ENST00000641636 310 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 AC006020.1-201ENST00000420179 1854 ntBASIC3.92□□□□□ -1.78
RNF220Q5VTB9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF220Q5VTB9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RNU6-1090P-201ENST00000364065 94 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.248-201ENST00000364501 109 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.255-201ENST00000364581 97 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 SNORA69-201ENST00000383895 132 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RNU6-1029P-201ENST00000384109 107 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RNU6-398P-201ENST00000384143 109 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.576-201ENST00000384781 102 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MIR192-201ENST00000384915 110 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MIR1277-201ENST00000408536 78 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RPS12P24-201ENST00000412619 387 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 CALM2P2-201ENST00000428512 440 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL139415.2-201ENST00000431968 163 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC000111.3-201ENST00000433478 193 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 HMGN2P7-201ENST00000456186 273 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RN7SL738P-201ENST00000470264 297 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MTAPP1-201ENST00000489154 819 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL160314.1-201ENST00000490836 438 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RPL30P5-201ENST00000494923 336 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 CEACAMP10-202ENST00000495431 496 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC104806.1-201ENST00000508720 308 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 TTC39CP1-201ENST00000512513 755 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC068831.4-201ENST00000556118 109 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 SNORA59B-202ENST00000578183 701 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AL158032.1-201ENST00000605401 106 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 AC012409.4-201ENST00000612923 249 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MTND1P37-201ENST00000636562 264 ntBASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF220Q5VTB9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF220Q5VTB9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF220Q5VTB9 AF127577.6-201ENST00000623352 2191 ntBASIC3.9□□□□□ -1.78
RNF220Q5VTB9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.9□□□□□ -1.78
RNF220Q5VTB9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RNF220Q5VTB9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF220Q5VTB9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF220Q5VTB9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 UBE2L2-201ENST00000254302 429 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 Y_RNA.256-201ENST00000364594 104 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL583835.1-201ENST00000399570 407 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL139397.2-201ENST00000404529 772 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL591034.1-201ENST00000407447 340 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms