Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 Y_RNA.142-201ENST00000363491 102 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 RNU2-25P-201ENST00000411041 191 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC073901.1-201ENST00000462471 408 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 HSPE1P3-201ENST00000559254 309 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC012557.2-201ENST00000605919 418 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRRK2Q5S007 AL356118.1-201ENST00000635272 1078 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC135776.4-201ENST00000624300 1904 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 RNA5SP489-201ENST00000410986 109 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 AC000111.3-201ENST00000433478 193 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 AC023424.2-201ENST00000493479 777 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 SEM1P1-201ENST00000506694 209 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.09□□□□□ -2.23
LRRK2Q5S007 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.09□□□□□ -2.23
LRRK2Q5S007 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
LRRK2Q5S007 HSPE1P11-201ENST00000339579 310 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 RNU6-288P-201ENST00000363690 104 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
LRRK2Q5S007 HMGN2P38-201ENST00000423806 265 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 DPPA2P1-201ENST00000428060 556 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 AC104472.2-201ENST00000469035 601 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 AC093281.2-201ENST00000510153 597 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 AC104115.2-201ENST00000523026 687 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 APOOP3-201ENST00000536787 586 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 AL049838.1-201ENST00000563647 981 ntBASIC1.09□□□□□ -2.24
LRRK2Q5S007 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.09□□□□□ -2.24
LRRK2Q5S007 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LRRK2Q5S007 SNORA9.1-201ENST00000362412 131 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 SNORD114-23-201ENST00000363536 72 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 UBE2V1P13-201ENST00000436983 439 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 AK3P2-201ENST00000507976 429 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 Y_RNA.700-201ENST00000516806 100 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 AC009127.3-201ENST00000570531 403 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
LRRK2Q5S007 RPL35AP22-201ENST00000436855 335 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 MTCO2P9-201ENST00000503214 694 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.08□□□□□ -2.24
LRRK2Q5S007 MIR5589-201ENST00000579442 60 ntBASIC1.08□□□□□ -2.24
LRRK2Q5S007 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRK2Q5S007 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC008850.1-201ENST00000427546 362 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 PTGES3P5-201ENST00000455109 434 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 AL031775.1-201ENST00000607014 887 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 C2orf27A-204ENST00000623058 969 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRK2Q5S007 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRRK2Q5S007 RNY4P3-201ENST00000365254 95 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 SSXP10-201ENST00000402595 565 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC234775.1-201ENST00000454247 670 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 AP003072.2-201ENST00000527756 676 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AP003497.1-201ENST00000528472 562 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 GAS5-AS1-201ENST00000602767 694 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC123912.5-201ENST00000605470 343 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 XIST_intron.1-201ENST00000619444 68 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
LRRK2Q5S007 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRK2Q5S007 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
LRRK2Q5S007 MTND5P9-201ENST00000503854 1755 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LRRK2Q5S007 MIR1265-201ENST00000408444 86 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 SNRPEP10-201ENST00000420249 274 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 SNRPGP3-201ENST00000469405 227 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.06□□□□□ -2.24
LRRK2Q5S007 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 AC006338.1-201ENST00000618453 749 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 AC002550.2-201ENST00000621246 394 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 AC130650.2-201ENST00000618736 2403 ntBASIC1.06□□□□□ -2.24
LRRK2Q5S007 RNF6P1-201ENST00000444889 1784 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms