Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 snoU13.31-201ENST00000607291 104 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AP002826.1-201ENST00000608835 315 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AL391813.2-201ENST00000609113 322 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC106858.1-201ENST00000637497 429 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC092447.7-201ENST00000422212 1621 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AL513185.3-201ENST00000433335 1300 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTCH1Q13635 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTCH1Q13635 SNORA1.3-201ENST00000384676 136 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 RNA5SP213-201ENST00000391031 106 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.11□□□□□ -1.91
PTCH1Q13635 RPL7P30-201ENST00000420888 709 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 SEPT7P5-201ENST00000434048 306 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 Z82190.1-201ENST00000454534 490 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AP000705.1-201ENST00000454567 350 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AC093801.2-201ENST00000503966 1050 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCH1Q13635 OR10V3P-201ENST00000525712 725 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 MTCO3P15-201ENST00000526563 574 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCH1Q13635 MTCO3P24-201ENST00000572729 782 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AL391001.1-201ENST00000602747 715 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AL445435.1-201ENST00000604232 665 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 AC012443.1-201ENST00000605605 231 ntBASIC3.11□□□□□ -1.91
PTCH1Q13635 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTCH1Q13635 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTCH1Q13635 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCH1Q13635 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCH1Q13635 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 RPS4XP3-201ENST00000398541 413 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 RNU2-2P-201ENST00000410396 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCH1Q13635 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AL353729.1-201ENST00000425044 720 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC013262.1-201ENST00000426710 252 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC009414.1-201ENST00000427200 443 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCH1Q13635 ARF4P4-201ENST00000439608 520 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.1□□□□□ -1.91
PTCH1Q13635 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.1□□□□□ -1.91
PTCH1Q13635 AC104629.1-201ENST00000494226 508 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 NAMPTP2-201ENST00000505629 1115 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AP003467.2-201ENST00000520175 319 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.1□□□□□ -1.91
PTCH1Q13635 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCH1Q13635 LARP7P2-201ENST00000575306 125 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.1□□□□□ -1.91
PTCH1Q13635 AP001521.1-201ENST00000609150 300 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC103710.1-201ENST00000610003 901 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.15-201ENST00000611544 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.16-201ENST00000613119 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.12-201ENST00000613778 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.20-201ENST00000613956 192 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.9-201ENST00000615427 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.11-201ENST00000616345 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.2-201ENST00000616535 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.3-201ENST00000617785 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.19-201ENST00000618602 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 RNU2-1-201ENST00000618664 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.6-201ENST00000619225 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.5-201ENST00000619465 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U2.10-201ENST00000620268 191 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC009831.4-201ENST00000620744 325 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 U6.101-201ENST00000637707 76 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.1□□□□□ -1.91
PTCH1Q13635 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.1□□□□□ -1.91
PTCH1Q13635 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 MIR6073-201ENST00000352083 89 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 Y_RNA.25-201ENST00000362528 102 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 RNU6-1155P-201ENST00000363554 107 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 MIR493-201ENST00000385254 89 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 MTCO1P3-201ENST00000429327 192 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 YWHAZP7-201ENST00000436906 631 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC093155.1-201ENST00000440164 826 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 HSPE1P28-201ENST00000443139 211 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCH1Q13635 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 USP9YP34-201ENST00000453983 808 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCH1Q13635 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCH1Q13635 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.1□□□□□ -1.91
PTCH1Q13635 SETP7-201ENST00000552169 453 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC023825.1-201ENST00000566704 1030 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC011494.1-201ENST00000596454 237 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 BNIP3P39-201ENST00000601077 554 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC099785.1-201ENST00000605697 437 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 AC093591.3-201ENST00000634516 308 ntBASIC3.1□□□□□ -1.91
PTCH1Q13635 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PTCH1Q13635 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTCH1Q13635 AP002907.1-201ENST00000606361 1430 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms