Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AL353748.2-201ENST00000622148 471 ntBASIC5.63□□□□□ -1.51
NR1H3Q13133 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H3Q13133 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
NR1H3Q13133 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
NR1H3Q13133 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H3Q13133 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NR1H3Q13133 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NR1H3Q13133 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H3Q13133 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 AC009812.4-201ENST00000569134 1805 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H3Q13133 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H3Q13133 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 Y_RNA.20-201ENST00000362479 113 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 RNU5A-1-201ENST00000362698 116 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 RNU1-76P-201ENST00000362903 159 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 RNU6-595P-201ENST00000363944 107 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 SNORD27-201ENST00000363981 72 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 OR1L6-202ENST00000373684 1044 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 Y_RNA.416-201ENST00000384014 113 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AL133270.1-201ENST00000402635 279 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 Y_RNA.592-201ENST00000410274 109 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.62□□□□□ -1.51
NR1H3Q13133 COX5BP7-201ENST00000414780 274 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.62□□□□□ -1.51
NR1H3Q13133 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 RPEP5-201ENST00000441137 268 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AL589765.3-201ENST00000446084 462 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 RPL7AP6-201ENST00000477943 801 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 HSPE1P6-201ENST00000479457 291 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 SNRPCP2-201ENST00000504370 475 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AC008958.1-201ENST00000511047 682 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AC007016.1-201ENST00000512110 244 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 AC009314.1-201ENST00000603871 304 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 AC004852.3-201ENST00000614131 326 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NR1H3Q13133 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 MTND5P9-201ENST00000503854 1755 ntBASIC5.62□□□□□ -1.51
NR1H3Q13133 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NR1H3Q13133 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.62□□□□□ -1.51
NR1H3Q13133 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-37P-201ENST00000362692 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 U8.4-201ENST00000363626 134 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-11P-201ENST00000364234 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-7-201ENST00000364784 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU1-43P-201ENST00000365052 165 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-8-201ENST00000365467 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-25P-201ENST00000383873 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-1-201ENST00000383898 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-48P-201ENST00000384161 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-36P-201ENST00000384172 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-4P-201ENST00000384205 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-5P-201ENST00000384238 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 Y_RNA.785-201ENST00000384290 109 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-3P-201ENST00000384314 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-16P-201ENST00000384385 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-15P-201ENST00000384534 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-2-201ENST00000384627 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-29P-201ENST00000384637 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-9-201ENST00000384776 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.61□□□□□ -1.51
NR1H3Q13133 RNA5SP487-201ENST00000410186 122 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H3Q13133 RPL21P38-201ENST00000418090 167 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RPL19P16-201ENST00000433839 588 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AL389915.2-201ENST00000454576 441 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H3Q13133 RN7SL826P-201ENST00000479724 288 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 RN7SL97P-201ENST00000486780 299 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H3Q13133 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H3Q13133 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.61□□□□□ -1.51
NR1H3Q13133 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.61□□□□□ -1.51
NR1H3Q13133 AC068446.3-201ENST00000555285 382 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
NR1H3Q13133 AC090971.4-201ENST00000560291 1800 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AC100778.3-201ENST00000580060 1750 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.61□□□□□ -1.51
NR1H3Q13133 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
NR1H3Q13133 RNU6-6P-201ENST00000606623 107 ntBASIC5.61□□□□□ -1.51
NR1H3Q13133 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.61□□□□□ -1.51
NR1H3Q13133 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NR1H3Q13133 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NR1H3Q13133 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NR1H3Q13133 AL391684.1-202ENST00000641293 1636 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms