Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR373-201ENST00000362273 69 ntBASIC2.15□□□□□ -2.07
HMGXB3Q12766 MIR92A2-201ENST00000385299 75 ntBASIC2.15□□□□□ -2.07
HMGXB3Q12766 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGXB3Q12766 UBE2V1P6-201ENST00000430840 422 ntBASIC2.15□□□□□ -2.07
HMGXB3Q12766 Y_RNA.681-201ENST00000516445 113 ntBASIC2.15□□□□□ -2.07
HMGXB3Q12766 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
HMGXB3Q12766 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGXB3Q12766 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGXB3Q12766 RNU4-7P-201ENST00000364758 141 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 RNU6-225P-201ENST00000384613 103 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HMGXB3Q12766 RPL31P2-201ENST00000413849 377 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 HMGN2P21-201ENST00000447764 270 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 NOP56P3-201ENST00000549457 385 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 GLUD1P4-201ENST00000590914 418 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 uc_338.20-201ENST00000621563 178 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 AC116618.1-201ENST00000634617 774 ntBASIC2.14□□□□□ -2.07
HMGXB3Q12766 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGXB3Q12766 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HMGXB3Q12766 SNORD56.5-201ENST00000364281 72 ntBASIC2.13□□□□□ -2.07
HMGXB3Q12766 Y_RNA.393-201ENST00000383936 102 ntBASIC2.13□□□□□ -2.07
HMGXB3Q12766 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGXB3Q12766 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGXB3Q12766 RPL31P41-201ENST00000477967 372 ntBASIC2.13□□□□□ -2.07
HMGXB3Q12766 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
HMGXB3Q12766 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HMGXB3Q12766 CUL4AP1-201ENST00000514750 1863 ntBASIC2.13□□□□□ -2.07
HMGXB3Q12766 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGXB3Q12766 MTND4LP21-201ENST00000415303 295 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 SEM1P1-201ENST00000506694 209 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 MIR98-201ENST00000606724 119 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AC135776.4-201ENST00000624300 1904 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 RNU4-91P-201ENST00000364778 135 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 PRELID3BP11-201ENST00000414230 479 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 ELOCP6-201ENST00000429066 328 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 RFC5P1-201ENST00000454419 874 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 ELOCP12-201ENST00000458706 328 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 FAM106CP-201ENST00000582212 507 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 AL445493.3-201ENST00000619568 477 ntBASIC2.12□□□□□ -2.07
HMGXB3Q12766 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGXB3Q12766 MTND4P34-201ENST00000572715 1371 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGXB3Q12766 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGXB3Q12766 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGXB3Q12766 RNU1-101P-201ENST00000391171 127 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 RPL23AP47-201ENST00000408017 460 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 RNU6-516P-201ENST00000411381 104 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 TRGV6-201ENST00000417928 299 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 HSPE1P1-201ENST00000421494 318 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGXB3Q12766 RPL21P103-201ENST00000479921 488 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGXB3Q12766 AC010625.1-201ENST00000511296 403 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
HMGXB3Q12766 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGXB3Q12766 RNA5SP108-201ENST00000605921 117 ntBASIC2.11□□□□□ -2.07
HMGXB3Q12766 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 AL030996.1-201ENST00000411430 235 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 RFESDP1-201ENST00000422350 461 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 AL022400.1-201ENST00000423946 935 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGXB3Q12766 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGXB3Q12766 AC023050.1-201ENST00000498198 304 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 AC010627.1-201ENST00000503819 1294 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 RNA5SP395-201ENST00000516567 118 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 RNU6-113P-201ENST00000516653 101 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 OR5AQ1P-201ENST00000527596 927 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 OR4R1P-201ENST00000529879 463 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 MTCO1P40-201ENST00000574371 625 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGXB3Q12766 AC008133.2-201ENST00000624540 351 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGXB3Q12766 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.1□□□□□ -2.07
HMGXB3Q12766 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGXB3Q12766 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGXB3Q12766 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGXB3Q12766 DYNLL1P5-201ENST00000467158 270 ntBASIC2.09□□□□□ -2.07
HMGXB3Q12766 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGXB3Q12766 RN7SL793P-201ENST00000583259 296 ntBASIC2.09□□□□□ -2.07
HMGXB3Q12766 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.07
HMGXB3Q12766 AC112503.2-201ENST00000609005 552 ntBASIC2.09□□□□□ -2.07
HMGXB3Q12766 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGXB3Q12766 AC130650.2-201ENST00000618736 2403 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 SNORA18.2-201ENST00000383865 132 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 RNU1-148P-201ENST00000384472 162 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 MTND5P25-201ENST00000430499 799 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGXB3Q12766 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGXB3Q12766 AC108059.3-201ENST00000456388 214 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 RNU6-405P-201ENST00000516637 110 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 RNU6-467P-201ENST00000517027 110 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 AC118942.1-201ENST00000529674 1035 ntBASIC2.08□□□□□ -2.08
HMGXB3Q12766 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGXB3Q12766 SYF2P1-201ENST00000550658 413 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms