Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH1Q08174 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.9□□□□□ -1.62
PCDH1Q08174 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH1Q08174 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH1Q08174 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH1Q08174 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PCDH1Q08174 RNY1P16-201ENST00000363063 111 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 MT-TW-201ENST00000387382 68 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDH1Q08174 RNU6-882P-201ENST00000391025 103 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RN7SKP114-201ENST00000410327 279 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RNU6-607P-201ENST00000411283 108 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC063979.1-201ENST00000415539 377 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RBMY1KP-201ENST00000423480 476 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 AL138785.1-201ENST00000425821 331 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDH1Q08174 RPS3AP12-201ENST00000443616 753 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RPL29P29-201ENST00000448725 423 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 MTCO3P8-201ENST00000453691 755 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RN7SL172P-201ENST00000460535 303 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RPS26P39-201ENST00000469206 341 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 RPS4XP1-201ENST00000482189 787 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDH1Q08174 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 GMPSP1-201ENST00000514075 579 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDH1Q08174 ACA59.1-201ENST00000515966 143 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 OR5D17P-201ENST00000531492 978 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 CBX3P8-201ENST00000532412 525 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDH1Q08174 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDH1Q08174 BNIP3P5-201ENST00000562290 498 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC006600.1-201ENST00000572529 153 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC005951.2-201ENST00000576282 495 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 MIR4273-201ENST00000582824 84 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC141273.2-201ENST00000618989 130 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 AC103858.2-201ENST00000621471 543 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH1Q08174 AC000123.3-201ENST00000624029 4975 ntBASIC4.9□□□□□ -1.63
PCDH1Q08174 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDH1Q08174 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDH1Q08174 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDH1Q08174 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDH1Q08174 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH1Q08174 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH1Q08174 MAPK10-349ENST00000641767 3661 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH1Q08174 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDH1Q08174 SNORA74A-201ENST00000364089 198 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 Y_RNA.214-201ENST00000364201 112 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 RNU1-43P-201ENST00000365052 165 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 UBBP2-201ENST00000376781 231 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 Y_RNA.483-201ENST00000384380 101 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 Y_RNA.551-201ENST00000384661 102 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 RNU6-837P-201ENST00000391056 108 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AP000580.1-201ENST00000404439 358 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH1Q08174 CYCSP33-201ENST00000414485 327 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH1Q08174 BX323845.1-201ENST00000432417 179 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC009127.1-201ENST00000467090 155 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 RPL23AP2-201ENST00000471227 466 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 VN1R104P-201ENST00000505115 1009 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDH1Q08174 RN7SL435P-201ENST00000584418 282 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AC068790.4-201ENST00000602474 263 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 SNORD91B-202ENST00000608459 222 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 AC126915.2-201ENST00000610957 190 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 SNORD39.4-201ENST00000620099 78 ntBASIC4.89□□□□□ -1.63
PCDH1Q08174 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDH1Q08174 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDH1Q08174 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 SMG1P6-201ENST00000532337 2930 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 LINC01355-201ENST00000566551 5444 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDH1Q08174 RNY3P11-201ENST00000364153 102 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 Y_RNA.526-201ENST00000384572 110 ntBASIC4.88□□□□□ -1.63
PCDH1Q08174 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDH1Q08174 AL109941.1-201ENST00000401925 229 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms