Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SNRPEP9-201ENST00000436794 238 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AL512286.1-201ENST00000439244 400 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.01□□□□□ -1.93
SCN1BQ07699 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC009296.1-201ENST00000443146 155 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC016696.1-201ENST00000446949 318 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC008264.1-201ENST00000447612 367 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AL358232.1-201ENST00000448030 501 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 CECR9-201ENST00000453421 199 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 RPL26P9-201ENST00000457466 433 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RPL37P6-201ENST00000460682 294 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC103987.1-201ENST00000473394 348 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RPS26P21-201ENST00000475397 348 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RPL36AP51-201ENST00000487216 318 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN1BQ07699 RNU6-201P-201ENST00000517100 61 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 MTCO1P47-201ENST00000523889 1271 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.01□□□□□ -1.93
SCN1BQ07699 VN1R85P-201ENST00000601587 426 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC098826.3-201ENST00000603823 466 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AL161798.1-201ENST00000604630 131 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AP000860.1-201ENST00000605250 559 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC004805.2-201ENST00000605382 482 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC105129.3-201ENST00000605455 485 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC063944.3-201ENST00000609969 533 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC008498.1-201ENST00000613012 531 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 MIR7844-201ENST00000616161 122 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 UCA1.1-201ENST00000620952 75 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC090617.7-201ENST00000623952 126 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC068057.2-201ENST00000624047 895 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCN1BQ07699 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN1BQ07699 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 RNY4P16-201ENST00000364768 94 ntBASIC3□□□□□ -1.93
SCN1BQ07699 RNU6-701P-201ENST00000384059 107 ntBASIC3□□□□□ -1.93
SCN1BQ07699 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3□□□□□ -1.93
SCN1BQ07699 MIR888-201ENST00000401186 77 ntBASIC3□□□□□ -1.93
SCN1BQ07699 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3□□□□□ -1.93
SCN1BQ07699 AL035423.1-201ENST00000420331 213 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3□□□□□ -1.93
SCN1BQ07699 OR2AS1P-201ENST00000427827 319 ntBASIC3□□□□□ -1.93
SCN1BQ07699 ELOCP14-201ENST00000428070 331 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AL353705.1-201ENST00000433468 480 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC007389.2-201ENST00000434630 306 ntBASIC3□□□□□ -1.93
SCN1BQ07699 ELOCP7-201ENST00000439968 331 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 AC097262.1-201ENST00000452559 548 ntBASIC3□□□□□ -1.93
SCN1BQ07699 RPL7P15-201ENST00000461190 712 ntBASIC3□□□□□ -1.93
SCN1BQ07699 MRPS17P3-201ENST00000465453 385 ntBASIC3□□□□□ -1.93
SCN1BQ07699 RPS3AP22-201ENST00000488297 769 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC112204.1-201ENST00000502591 103 ntBASIC3□□□□□ -1.93
SCN1BQ07699 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 RPF2P2-201ENST00000504693 896 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC005178.1-201ENST00000508392 440 ntBASIC3□□□□□ -1.93
SCN1BQ07699 PRELID3BP5-201ENST00000508612 460 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3□□□□□ -1.93
SCN1BQ07699 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
SCN1BQ07699 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3□□□□□ -1.93
SCN1BQ07699 AC025881.1-201ENST00000518851 512 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC087373.1-201ENST00000524920 491 ntBASIC3□□□□□ -1.93
SCN1BQ07699 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
SCN1BQ07699 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3□□□□□ -1.93
SCN1BQ07699 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3□□□□□ -1.93
SCN1BQ07699 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3□□□□□ -1.93
SCN1BQ07699 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3□□□□□ -1.93
SCN1BQ07699 AC010620.2-201ENST00000600135 313 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC010591.1-201ENST00000603941 649 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AL035413.2-201ENST00000604801 525 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC121334.2-201ENST00000605387 271 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC018638.7-201ENST00000605836 1114 ntBASIC3□□□□□ -1.93
SCN1BQ07699 RNU1-30P-201ENST00000606575 163 ntBASIC3□□□□□ -1.93
SCN1BQ07699 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
SCN1BQ07699 BX664608.1-201ENST00000610519 487 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
SCN1BQ07699 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN1BQ07699 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
SCN1BQ07699 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
SCN1BQ07699 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
SCN1BQ07699 AP003355.3-201ENST00000623465 114 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms