Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR147B-201ENST00000390185 80 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RNU6-1328P-201ENST00000410938 106 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RNA5SP508-201ENST00000411327 119 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AL356867.1-201ENST00000429623 299 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 MTCO3P17-201ENST00000443775 513 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC009237.8-201ENST00000445492 379 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RPL23AP42-201ENST00000471152 471 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AP000926.3-201ENST00000497201 299 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC147055.4-201ENST00000504399 745 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 OR4P1P-201ENST00000530808 1136 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC010186.2-204ENST00000537668 439 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 MIR4435-1-201ENST00000582552 80 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AL355297.2-201ENST00000604792 129 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AL162233.1-201ENST00000620014 944 ntBASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HIST1H1AQ02539 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AL035405.1-201ENST00000400795 710 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 TAAR7P-201ENST00000436141 242 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AL353689.1-201ENST00000438895 199 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 TPT1P14-201ENST00000448018 505 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 HMGN1P5-201ENST00000448591 263 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 CDC42P1-201ENST00000456658 548 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 SUMO2P6-201ENST00000505273 288 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 RNU6-1282P-201ENST00000516735 96 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 HMGN1P28-201ENST00000521340 364 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AF131215.7-201ENST00000602443 707 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC018618.2-201ENST00000604770 446 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 AC092608.3-201ENST00000625017 386 ntBASIC1.5□□□□□ -2.17
HIST1H1AQ02539 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HIST1H1AQ02539 OR4G2P-202ENST00000641004 1759 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 XGY1-201ENST00000381172 446 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 RNU1-148P-201ENST00000384472 162 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 RNU6-882P-201ENST00000391025 103 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC092745.2-202ENST00000411880 369 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AL139156.1-201ENST00000412785 841 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 Z85995.1-201ENST00000415547 335 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AL009174.1-201ENST00000426577 416 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC093106.2-201ENST00000428212 385 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 HMGB1P9-201ENST00000429856 646 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 MICF-203ENST00000432679 129 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 RAB11AP1-201ENST00000442978 646 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC020699.1-201ENST00000505161 445 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 HMGB1P47-201ENST00000511281 589 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC106734.1-201ENST00000568646 663 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 MIR1273D-201ENST00000577266 86 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC013444.2-201ENST00000603317 787 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AL390862.1-201ENST00000635467 1469 ntBASIC1.49□□□□□ -2.17
HIST1H1AQ02539 AC009487.4-201ENST00000624969 3585 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 MIR449A-201ENST00000362113 91 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 RNU6-921P-201ENST00000384361 107 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 SNORA67.3-201ENST00000384366 140 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 SNORA64-201ENST00000384674 134 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL023284.1-201ENST00000403956 276 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms