Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP002784.2-201ENST00000397300 549 ntBASIC2.27□□□□□ -2.05
TPM4P67936 BTF3P7-201ENST00000407097 488 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC096664.2-201ENST00000411843 406 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM4P67936 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TPM4P67936 AC009963.1-201ENST00000417265 157 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.27□□□□□ -2.05
TPM4P67936 Z80107.1-201ENST00000436830 412 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC002542.1-201ENST00000440683 193 ntBASIC2.27□□□□□ -2.05
TPM4P67936 USP9YP8-201ENST00000441913 500 ntBASIC2.27□□□□□ -2.05
TPM4P67936 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM4P67936 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM4P67936 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM4P67936 MTCO1P48-201ENST00000448024 1096 ntBASIC2.27□□□□□ -2.05
TPM4P67936 SETP6-201ENST00000479329 568 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.27□□□□□ -2.05
TPM4P67936 RNU5F-8P-201ENST00000515941 111 ntBASIC2.27□□□□□ -2.05
TPM4P67936 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.27□□□□□ -2.05
TPM4P67936 FAM92A1P1-201ENST00000528023 890 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AP002748.2-201ENST00000528671 348 ntBASIC2.27□□□□□ -2.05
TPM4P67936 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.27□□□□□ -2.05
TPM4P67936 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.27□□□□□ -2.05
TPM4P67936 MIR6873-201ENST00000622788 63 ntBASIC2.27□□□□□ -2.05
TPM4P67936 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TPM4P67936 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
TPM4P67936 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
TPM4P67936 HMGB1P5-201ENST00000255320 642 ntBASIC2.26□□□□□ -2.05
TPM4P67936 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TPM4P67936 PTP4A1P7-201ENST00000423476 514 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.26□□□□□ -2.05
TPM4P67936 AL451074.3-201ENST00000437709 472 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC241584.1-201ENST00000438469 1241 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AL049734.2-201ENST00000441066 616 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.26□□□□□ -2.05
TPM4P67936 CBWD4P-201ENST00000445695 655 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC096576.1-201ENST00000489014 359 ntBASIC2.26□□□□□ -2.05
TPM4P67936 MTCO2P9-201ENST00000503214 694 ntBASIC2.26□□□□□ -2.05
TPM4P67936 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
TPM4P67936 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.26□□□□□ -2.05
TPM4P67936 AP005902.1-201ENST00000521358 186 ntBASIC2.26□□□□□ -2.05
TPM4P67936 OR5AQ1P-201ENST00000527596 927 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC124947.2-202ENST00000552735 133 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.26□□□□□ -2.05
TPM4P67936 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.26□□□□□ -2.05
TPM4P67936 AC093519.1-201ENST00000566109 298 ntBASIC2.26□□□□□ -2.05
TPM4P67936 HMGN2P15-201ENST00000585707 270 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC021749.1-201ENST00000604322 607 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC106730.3-201ENST00000624568 641 ntBASIC2.26□□□□□ -2.05
TPM4P67936 AC132825.7-201ENST00000638744 335 ntBASIC2.26□□□□□ -2.05
TPM4P67936 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.26□□□□□ -2.05
TPM4P67936 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
TPM4P67936 AC004944.1-201ENST00000517807 3059 ntBASIC2.26□□□□□ -2.05
TPM4P67936 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
TPM4P67936 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TPM4P67936 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
TPM4P67936 RNU6-582P-201ENST00000362989 107 ntBASIC2.25□□□□□ -2.05
TPM4P67936 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
TPM4P67936 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TPM4P67936 AL356057.1-202ENST00000402263 756 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AL030996.1-201ENST00000411430 235 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.25□□□□□ -2.05
TPM4P67936 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.25□□□□□ -2.05
TPM4P67936 UBE2FP3-201ENST00000436366 524 ntBASIC2.25□□□□□ -2.05
TPM4P67936 EEF1B2P7-201ENST00000451177 676 ntBASIC2.25□□□□□ -2.05
TPM4P67936 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TPM4P67936 AC126389.1-201ENST00000477436 290 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AC004924.1-201ENST00000480160 781 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AC138853.1-201ENST00000503549 823 ntBASIC2.25□□□□□ -2.05
TPM4P67936 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.25□□□□□ -2.05
TPM4P67936 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.25□□□□□ -2.05
TPM4P67936 AC023141.11-201ENST00000508864 202 ntBASIC2.25□□□□□ -2.05
TPM4P67936 SCARNA15.2-201ENST00000516409 127 ntBASIC2.25□□□□□ -2.05
TPM4P67936 RNU6-1256P-201ENST00000516539 103 ntBASIC2.25□□□□□ -2.05
TPM4P67936 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.25□□□□□ -2.05
TPM4P67936 AL138976.2-201ENST00000563989 694 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AC133794.1-201ENST00000602731 914 ntBASIC2.25□□□□□ -2.05
TPM4P67936 AC068057.2-201ENST00000624047 895 ntBASIC2.25□□□□□ -2.05
TPM4P67936 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
TPM4P67936 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TPM4P67936 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TPM4P67936 RNU1-73P-201ENST00000383971 164 ntBASIC2.24□□□□□ -2.05
TPM4P67936 RNU6-76P-201ENST00000384060 104 ntBASIC2.24□□□□□ -2.05
TPM4P67936 MIR514A1-201ENST00000385133 98 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AL031679.1-201ENST00000400616 525 ntBASIC2.24□□□□□ -2.05
TPM4P67936 TMSB4XP8-201ENST00000402089 135 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.24□□□□□ -2.05
TPM4P67936 TMSB4XP6-201ENST00000415187 135 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 TMSB4XP1-201ENST00000424567 135 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC092047.1-201ENST00000424997 240 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC027124.2-201ENST00000428249 105 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC114878.1-201ENST00000441166 358 ntBASIC2.24□□□□□ -2.05
TPM4P67936 BNIP3P2-201ENST00000441221 577 ntBASIC2.24□□□□□ -2.05
TPM4P67936 OSTCP8-201ENST00000445117 448 ntBASIC2.24□□□□□ -2.05
TPM4P67936 KLF3P2-201ENST00000465138 268 ntBASIC2.24□□□□□ -2.05
TPM4P67936 LARP1BP2-201ENST00000486594 519 ntBASIC2.24□□□□□ -2.05
TPM4P67936 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM4P67936 RNA5SP135-201ENST00000517019 125 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms