Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 U8.3-201ENST00000363321 132 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 SNORA7.2-201ENST00000364446 145 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 SNORA33.2-201ENST00000365413 134 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 Y_RNA.402-201ENST00000383972 102 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 RNU6-26P-201ENST00000383985 107 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 RNU6-878P-201ENST00000384578 110 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 PTMAP5-201ENST00000393073 333 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 MIR548P-201ENST00000408336 84 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 RNU6-195P-201ENST00000411352 109 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC012065.2-201ENST00000421295 375 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AL353193.1-201ENST00000421444 268 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 ISCA1P6-201ENST00000427740 390 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN1P54253 MRPS18BP2-201ENST00000434310 759 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC236972.2-201ENST00000434979 310 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 SDCBPP1-201ENST00000440192 890 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN1P54253 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AC068781.1-201ENST00000488231 618 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC025554.1-201ENST00000505641 188 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 TXNP6-201ENST00000510190 310 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.3□□□□□ -1.72
ATXN1P54253 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.3□□□□□ -1.72
ATXN1P54253 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC093249.1-201ENST00000567049 203 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 RPL23AP87-202ENST00000573039 466 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
ATXN1P54253 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN1P54253 RNU6-87P-201ENST00000607561 108 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AC137590.2-201ENST00000619709 240 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AL078596.1-201ENST00000624856 447 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 MIR3662-201ENST00000637030 95 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN1P54253 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN1P54253 ZNF962P-201ENST00000443465 3140 ntBASIC4.3□□□□□ -1.72
ATXN1P54253 AC092447.10-201ENST00000620607 1652 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATXN1P54253 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 Z82217.1-201ENST00000625157 8149 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 SNORA31-201ENST00000362607 130 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 SNORA63.7-201ENST00000365579 123 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 MIR218-2-201ENST00000385006 110 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ATXN1P54253 AL356421.1-201ENST00000403255 413 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RPL7P25-201ENST00000404151 721 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AL583834.1-201ENST00000406943 343 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RNU2-39P-201ENST00000410604 198 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AC108032.1-201ENST00000416706 207 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 SAR1AP4-201ENST00000429225 591 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AL590233.1-201ENST00000430017 456 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.29□□□□□ -1.72
ATXN1P54253 AL451074.3-201ENST00000437709 472 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RPL23AP46-201ENST00000438548 490 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 RPL39P36-201ENST00000490784 156 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 KCTD9P5-201ENST00000504141 1170 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.29□□□□□ -1.72
ATXN1P54253 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 Y_RNA.672-201ENST00000516289 104 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RNA5SP309-201ENST00000516670 106 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 RNU2-46P-201ENST00000517038 113 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.29□□□□□ -1.72
ATXN1P54253 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 AC024224.1-201ENST00000538284 609 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.29□□□□□ -1.72
ATXN1P54253 AC008269.2-201ENST00000561915 1105 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 AC009093.8-201ENST00000641769 292 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ATXN1P54253 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN1P54253 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
ATXN1P54253 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ATXN1P54253 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN1P54253 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN1P54253 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN1P54253 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN1P54253 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN1P54253 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN1P54253 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ATXN1P54253 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN1P54253 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
ATXN1P54253 MIR369-201ENST00000362155 70 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms