Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MSH6P52701 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
MSH6P52701 RNU6-1066P-201ENST00000363573 105 ntBASIC2.9□□□□□ -1.94
MSH6P52701 RNU6-1257P-201ENST00000384625 110 ntBASIC2.9□□□□□ -1.94
MSH6P52701 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
MSH6P52701 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.9□□□□□ -1.94
MSH6P52701 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.94
MSH6P52701 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.9□□□□□ -1.94
MSH6P52701 RPL23AP20-201ENST00000447965 421 ntBASIC2.9□□□□□ -1.94
MSH6P52701 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.9□□□□□ -1.94
MSH6P52701 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.9□□□□□ -1.94
MSH6P52701 AC005840.1-201ENST00000498412 377 ntBASIC2.9□□□□□ -1.94
MSH6P52701 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.9□□□□□ -1.94
MSH6P52701 RNU6-1073P-201ENST00000517182 106 ntBASIC2.9□□□□□ -1.94
MSH6P52701 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.9□□□□□ -1.94
MSH6P52701 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.9□□□□□ -1.94
MSH6P52701 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.9□□□□□ -1.94
MSH6P52701 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
MSH6P52701 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.9□□□□□ -1.94
MSH6P52701 CU459211.1-201ENST00000635667 749 ntBASIC2.9□□□□□ -1.94
MSH6P52701 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
MSH6P52701 RNU6-1181P-201ENST00000384191 106 ntBASIC2.89□□□□□ -1.95
MSH6P52701 SNORA40.18-201ENST00000391200 128 ntBASIC2.89□□□□□ -1.95
MSH6P52701 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC069282.1-201ENST00000411911 526 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AL139156.1-201ENST00000412785 841 ntBASIC2.89□□□□□ -1.95
MSH6P52701 RPS7P9-201ENST00000414704 586 ntBASIC2.89□□□□□ -1.95
MSH6P52701 BTF3P4-201ENST00000418852 495 ntBASIC2.89□□□□□ -1.95
MSH6P52701 RPL21P66-201ENST00000426566 466 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC104332.2-201ENST00000429959 156 ntBASIC2.89□□□□□ -1.95
MSH6P52701 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH6P52701 KLRA1P-201ENST00000503499 986 ntBASIC2.89□□□□□ -1.95
MSH6P52701 BOLA3P3-201ENST00000505182 232 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MSH6P52701 MTND5P4-201ENST00000514978 288 ntBASIC2.89□□□□□ -1.95
MSH6P52701 SNORA31.20-201ENST00000517111 133 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH6P52701 MTCO3P15-201ENST00000526563 574 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH6P52701 AC087897.1-201ENST00000550134 156 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AL583856.2-201ENST00000606298 543 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AL512427.1-201ENST00000618593 349 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH6P52701 AL157770.1-201ENST00000623049 439 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC006963.1-201ENST00000624003 1052 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC126544.2-201ENST00000625174 749 ntBASIC2.89□□□□□ -1.95
MSH6P52701 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH6P52701 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MSH6P52701 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
MSH6P52701 RNU6-492P-201ENST00000363035 104 ntBASIC2.88□□□□□ -1.95
MSH6P52701 RNU6-1249P-201ENST00000363237 111 ntBASIC2.88□□□□□ -1.95
MSH6P52701 RNU6-821P-201ENST00000390995 107 ntBASIC2.88□□□□□ -1.95
MSH6P52701 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH6P52701 AC092634.6-201ENST00000418558 192 ntBASIC2.88□□□□□ -1.95
MSH6P52701 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH6P52701 RAC1P8-201ENST00000427086 527 ntBASIC2.88□□□□□ -1.95
MSH6P52701 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.88□□□□□ -1.95
MSH6P52701 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.88□□□□□ -1.95
MSH6P52701 PTGES3P1-201ENST00000439531 483 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH6P52701 FABP5P13-201ENST00000452144 328 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC010285.1-201ENST00000470580 392 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AL163540.1-201ENST00000485382 386 ntBASIC2.88□□□□□ -1.95
MSH6P52701 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH6P52701 AC008427.1-201ENST00000503102 655 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC090502.2-201ENST00000549267 280 ntBASIC2.88□□□□□ -1.95
MSH6P52701 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.88□□□□□ -1.95
MSH6P52701 AC087481.2-201ENST00000565492 330 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH6P52701 AC090079.2-201ENST00000575289 768 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH6P52701 XIAPP1-201ENST00000603162 600 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AL592148.2-201ENST00000612210 372 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC091834.1-201ENST00000614543 472 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC008083.4-201ENST00000615076 444 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC253576.2-201ENST00000618815 580 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC009318.4-201ENST00000620496 486 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AC080188.3-201ENST00000624842 748 ntBASIC2.88□□□□□ -1.95
MSH6P52701 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH6P52701 AC087821.2-201ENST00000637086 450 ntBASIC2.88□□□□□ -1.95
MSH6P52701 AL136520.1-201ENST00000600311 1322 ntBASIC2.88□□□□□ -1.95
MSH6P52701 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH6P52701 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH6P52701 HMGB1P5-201ENST00000255320 642 ntBASIC2.87□□□□□ -1.95
MSH6P52701 Y_RNA.122-201ENST00000363331 96 ntBASIC2.87□□□□□ -1.95
MSH6P52701 SUGT1P1-201ENST00000379514 476 ntBASIC2.87□□□□□ -1.95
MSH6P52701 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH6P52701 BTF3P8-201ENST00000414577 526 ntBASIC2.87□□□□□ -1.95
MSH6P52701 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH6P52701 USP9YP21-201ENST00000420603 432 ntBASIC2.87□□□□□ -1.95
MSH6P52701 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.87□□□□□ -1.95
MSH6P52701 MTCYBP42-201ENST00000444653 1130 ntBASIC2.87□□□□□ -1.95
MSH6P52701 RPS20P24-201ENST00000457473 361 ntBASIC2.87□□□□□ -1.95
MSH6P52701 SNORD13-201ENST00000459299 104 ntBASIC2.87□□□□□ -1.95
MSH6P52701 HMGN2P13-201ENST00000476476 274 ntBASIC2.87□□□□□ -1.95
MSH6P52701 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MSH6P52701 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.87□□□□□ -1.95
MSH6P52701 SNORA48.10-201ENST00000516965 160 ntBASIC2.87□□□□□ -1.95
MSH6P52701 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms