Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.21□□□□□ -2.22
CENPFP49454 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.21□□□□□ -2.22
CENPFP49454 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CENPFP49454 CENPCP1-201ENST00000533085 2578 ntBASIC1.21□□□□□ -2.22
CENPFP49454 MIR1197-201ENST00000408818 88 ntBASIC1.21□□□□□ -2.22
CENPFP49454 RPS27P1-201ENST00000450552 247 ntBASIC1.21□□□□□ -2.22
CENPFP49454 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.21□□□□□ -2.22
CENPFP49454 RPL30P6-201ENST00000475925 342 ntBASIC1.21□□□□□ -2.22
CENPFP49454 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.21□□□□□ -2.22
CENPFP49454 RNU11-2P-201ENST00000516898 142 ntBASIC1.21□□□□□ -2.22
CENPFP49454 CBX3P7-201ENST00000532876 502 ntBASIC1.21□□□□□ -2.22
CENPFP49454 AC090517.3-201ENST00000625170 141 ntBASIC1.21□□□□□ -2.22
CENPFP49454 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.2□□□□□ -2.22
CENPFP49454 Y_RNA.518-201ENST00000384552 113 ntBASIC1.2□□□□□ -2.22
CENPFP49454 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.2□□□□□ -2.22
CENPFP49454 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.2□□□□□ -2.22
CENPFP49454 AC024619.4-201ENST00000580924 316 ntBASIC1.2□□□□□ -2.22
CENPFP49454 MTND4P31-201ENST00000425607 1343 ntBASIC1.2□□□□□ -2.22
CENPFP49454 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CENPFP49454 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.2□□□□□ -2.22
CENPFP49454 AC011330.2-201ENST00000621680 635 ntBASIC1.2□□□□□ -2.22
CENPFP49454 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.19□□□□□ -2.22
CENPFP49454 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.19□□□□□ -2.22
CENPFP49454 AC087808.1-201ENST00000520501 361 ntBASIC1.19□□□□□ -2.22
CENPFP49454 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.19□□□□□ -2.22
CENPFP49454 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CENPFP49454 RNU4-52P-201ENST00000384209 138 ntBASIC1.19□□□□□ -2.22
CENPFP49454 RNA5SP465-201ENST00000391195 109 ntBASIC1.19□□□□□ -2.22
CENPFP49454 Z86062.1-201ENST00000406773 777 ntBASIC1.19□□□□□ -2.22
CENPFP49454 AC099548.1-201ENST00000421443 426 ntBASIC1.19□□□□□ -2.22
CENPFP49454 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CENPFP49454 RPS15AP7-201ENST00000439294 405 ntBASIC1.19□□□□□ -2.22
CENPFP49454 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.19□□□□□ -2.22
CENPFP49454 RPL23AP62-201ENST00000463396 453 ntBASIC1.19□□□□□ -2.22
CENPFP49454 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.19□□□□□ -2.22
CENPFP49454 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.19□□□□□ -2.22
CENPFP49454 MIR4714-201ENST00000580728 77 ntBASIC1.19□□□□□ -2.22
CENPFP49454 AL512605.2-201ENST00000592972 256 ntBASIC1.19□□□□□ -2.22
CENPFP49454 GAS5-AS1-201ENST00000602767 694 ntBASIC1.19□□□□□ -2.22
CENPFP49454 MIR8087-201ENST00000612745 78 ntBASIC1.19□□□□□ -2.22
CENPFP49454 AC091925.1-201ENST00000623204 462 ntBASIC1.19□□□□□ -2.22
CENPFP49454 MIR924-201ENST00000638017 53 ntBASIC1.19□□□□□ -2.22
CENPFP49454 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CENPFP49454 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CENPFP49454 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CENPFP49454 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.19□□□□□ -2.22
CENPFP49454 RPL30P4-201ENST00000429309 333 ntBASIC1.19□□□□□ -2.22
CENPFP49454 PSMA2P3-201ENST00000429685 675 ntBASIC1.19□□□□□ -2.22
CENPFP49454 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.19□□□□□ -2.22
CENPFP49454 AC233266.2-201ENST00000567067 528 ntBASIC1.19□□□□□ -2.22
CENPFP49454 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.19□□□□□ -2.22
CENPFP49454 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CENPFP49454 RNU6-203P-201ENST00000384038 104 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AC090096.1-201ENST00000489168 390 ntBASIC1.18□□□□□ -2.22
CENPFP49454 DEFB108E-201ENST00000524692 240 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.18□□□□□ -2.22
CENPFP49454 AC025918.2-201ENST00000558683 763 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AL135786.2-201ENST00000608422 615 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CENPFP49454 Y_RNA.48-201ENST00000362710 103 ntBASIC1.18□□□□□ -2.22
CENPFP49454 RNU6-105P-201ENST00000363909 104 ntBASIC1.18□□□□□ -2.22
CENPFP49454 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.18□□□□□ -2.22
CENPFP49454 MTND2P9-201ENST00000422293 931 ntBASIC1.18□□□□□ -2.22
CENPFP49454 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.18□□□□□ -2.22
CENPFP49454 AC093281.2-201ENST00000510153 597 ntBASIC1.18□□□□□ -2.22
CENPFP49454 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.17□□□□□ -2.22
CENPFP49454 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.17□□□□□ -2.22
CENPFP49454 SNX5P1-201ENST00000505757 1041 ntBASIC1.17□□□□□ -2.22
CENPFP49454 MTCYBP37-201ENST00000510642 1133 ntBASIC1.17□□□□□ -2.22
CENPFP49454 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CENPFP49454 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CENPFP49454 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.17□□□□□ -2.22
CENPFP49454 FO393415.2-201ENST00000480085 343 ntBASIC1.17□□□□□ -2.22
CENPFP49454 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
CENPFP49454 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CENPFP49454 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CENPFP49454 AL121601.2-201ENST00000438019 707 ntBASIC1.17□□□□□ -2.22
CENPFP49454 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CENPFP49454 AP003499.2-201ENST00000624100 483 ntBASIC1.16□□□□□ -2.22
CENPFP49454 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CENPFP49454 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
CENPFP49454 RPL7P27-201ENST00000403775 720 ntBASIC1.16□□□□□ -2.22
CENPFP49454 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.16□□□□□ -2.22
CENPFP49454 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.16□□□□□ -2.22
CENPFP49454 AC010265.1-201ENST00000513509 211 ntBASIC1.16□□□□□ -2.22
CENPFP49454 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.16□□□□□ -2.22
CENPFP49454 AC008962.1-201ENST00000605729 304 ntBASIC1.16□□□□□ -2.22
CENPFP49454 AC018754.1-201ENST00000607486 925 ntBASIC1.16□□□□□ -2.22
CENPFP49454 AC103710.2-202ENST00000641454 2853 ntBASIC1.16□□□□□ -2.22
CENPFP49454 AC004941.2-201ENST00000427009 228 ntBASIC1.15□□□□□ -2.22
CENPFP49454 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.15□□□□□ -2.23
CENPFP49454 RNU11-5P-201ENST00000391216 129 ntBASIC1.15□□□□□ -2.23
CENPFP49454 FCF1P2-201ENST00000415284 583 ntBASIC1.15□□□□□ -2.23
CENPFP49454 AC023424.2-201ENST00000493479 777 ntBASIC1.15□□□□□ -2.23
CENPFP49454 AC006270.3-201ENST00000605967 1036 ntBASIC1.15□□□□□ -2.23
CENPFP49454 AC092140.2-201ENST00000618027 521 ntBASIC1.15□□□□□ -2.23
CENPFP49454 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CENPFP49454 AC123912.3-201ENST00000600907 1367 ntBASIC1.15□□□□□ -2.23
CENPFP49454 Y_RNA.136-201ENST00000363444 102 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms