Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 GMPSP1-201ENST00000514075 579 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.54□□□□□ -1.84
SOX2P48431 SNORA31.22-201ENST00000517204 135 ntBASIC3.54□□□□□ -1.84
SOX2P48431 RN7SKP92-201ENST00000517266 244 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
SOX2P48431 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX2P48431 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.54□□□□□ -1.84
SOX2P48431 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 FAM60BP-201ENST00000578364 658 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 FGF7P1-201ENST00000582820 288 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC024940.4-201ENST00000605507 246 ntBASIC3.54□□□□□ -1.84
SOX2P48431 HMGB1P50-201ENST00000605814 607 ntBASIC3.54□□□□□ -1.84
SOX2P48431 SDR42E1P2-201ENST00000614861 481 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.54□□□□□ -1.84
SOX2P48431 AC068831.8-201ENST00000620171 435 ntBASIC3.54□□□□□ -1.84
SOX2P48431 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX2P48431 AC011155.2-201ENST00000623202 216 ntBASIC3.54□□□□□ -1.84
SOX2P48431 AC100810.6-201ENST00000638068 285 ntBASIC3.54□□□□□ -1.84
SOX2P48431 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX2P48431 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.54□□□□□ -1.84
SOX2P48431 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 API5P2-201ENST00000397055 1498 ntBASIC3.54□□□□□ -1.84
SOX2P48431 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SOX2P48431 AC009812.4-201ENST00000569134 1805 ntBASIC3.54□□□□□ -1.84
SOX2P48431 IPO8P1-201ENST00000455509 3109 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MTND4P14-201ENST00000435799 1354 ntBASIC3.53□□□□□ -1.84
SOX2P48431 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 AL139276.1-201ENST00000311910 1001 ntBASIC3.53□□□□□ -1.84
SOX2P48431 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 SNORD115-7-201ENST00000365306 82 ntBASIC3.53□□□□□ -1.84
SOX2P48431 SMIM11P1-201ENST00000369586 178 ntBASIC3.53□□□□□ -1.84
SOX2P48431 RNU6-946P-201ENST00000383878 107 ntBASIC3.53□□□□□ -1.84
SOX2P48431 RNU6-1181P-201ENST00000384191 106 ntBASIC3.53□□□□□ -1.84
SOX2P48431 RNU6-903P-201ENST00000391270 109 ntBASIC3.53□□□□□ -1.84
SOX2P48431 RPS16P5-201ENST00000406501 404 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL606923.1-201ENST00000406616 190 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MIR1251-201ENST00000408552 70 ntBASIC3.53□□□□□ -1.84
SOX2P48431 RNU6-387P-201ENST00000411331 105 ntBASIC3.53□□□□□ -1.84
SOX2P48431 OR6C66P-201ENST00000414917 930 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 EI24P1-201ENST00000416584 867 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC068533.1-201ENST00000418542 415 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX2P48431 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.53□□□□□ -1.84
SOX2P48431 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX2P48431 AC018630.2-202ENST00000422992 927 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 AL358472.1-201ENST00000431295 329 ntBASIC3.53□□□□□ -1.84
SOX2P48431 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 RPL21P133-201ENST00000443666 476 ntBASIC3.53□□□□□ -1.84
SOX2P48431 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SOX2P48431 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 MTND1P11-201ENST00000456661 876 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL162395.1-201ENST00000457882 422 ntBASIC3.53□□□□□ -1.84
SOX2P48431 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 AC010285.1-201ENST00000470580 392 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC110792.1-201ENST00000491826 472 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX2P48431 AC008958.1-201ENST00000511047 682 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MTCO1P35-201ENST00000515270 228 ntBASIC3.53□□□□□ -1.84
SOX2P48431 NARSP2-201ENST00000518524 679 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.53□□□□□ -1.84
SOX2P48431 AP005435.4-201ENST00000529514 284 ntBASIC3.53□□□□□ -1.84
SOX2P48431 BNIP3P6-201ENST00000549284 499 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX2P48431 AC025627.2-201ENST00000576220 160 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MIR4644-201ENST00000579929 84 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 AC019193.2-201ENST00000610012 634 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL049539.1-201ENST00000611964 459 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AC010133.1-201ENST00000615809 842 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL359314.1-201ENST00000616913 261 ntBASIC3.53□□□□□ -1.84
SOX2P48431 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.53□□□□□ -1.84
SOX2P48431 AC007998.5-201ENST00000622938 237 ntBASIC3.53□□□□□ -1.84
SOX2P48431 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.53□□□□□ -1.84
SOX2P48431 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX2P48431 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SOX2P48431 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
SOX2P48431 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.53□□□□□ -1.85
SOX2P48431 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SOX2P48431 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
SOX2P48431 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SOX2P48431 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms