Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL445264.1-201ENST00000621719 171 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AC073308.1-201ENST00000623696 305 ntBASIC2.51□□□□□ -2.01
RFX3P48380 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX3P48380 AL445984.1-201ENST00000637834 659 ntBASIC2.51□□□□□ -2.01
RFX3P48380 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.51□□□□□ -2.01
RFX3P48380 AL022578.1-201ENST00000439330 1433 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL049641.1-201ENST00000441055 1948 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC006378.2-201ENST00000623178 2476 ntBASIC2.5□□□□□ -2.01
RFX3P48380 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFX3P48380 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
RFX3P48380 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RFX3P48380 SNORA25.6-201ENST00000364121 118 ntBASIC2.5□□□□□ -2.01
RFX3P48380 Y_RNA.234-201ENST00000364409 97 ntBASIC2.5□□□□□ -2.01
RFX3P48380 RNU6-952P-201ENST00000391164 108 ntBASIC2.5□□□□□ -2.01
RFX3P48380 RNA5SP354-201ENST00000391247 136 ntBASIC2.5□□□□□ -2.01
RFX3P48380 RPS3AP37-201ENST00000419176 745 ntBASIC2.5□□□□□ -2.01
RFX3P48380 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX3P48380 AC105272.1-201ENST00000438604 198 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AL109741.2-201ENST00000455561 343 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC092798.1-201ENST00000458542 409 ntBASIC2.5□□□□□ -2.01
RFX3P48380 snoU13.8-201ENST00000458890 104 ntBASIC2.5□□□□□ -2.01
RFX3P48380 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX3P48380 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.5□□□□□ -2.01
RFX3P48380 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.5□□□□□ -2.01
RFX3P48380 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.5□□□□□ -2.01
RFX3P48380 AC124947.2-202ENST00000552735 133 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC007954.1-201ENST00000554198 494 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC138761.3-201ENST00000579993 334 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC090616.3-201ENST00000582184 217 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC011451.2-201ENST00000604303 598 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AP000787.2-201ENST00000604432 568 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC103710.4-201ENST00000609301 899 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AL603758.1-201ENST00000618654 241 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC009269.6-201ENST00000621778 588 ntBASIC2.5□□□□□ -2.01
RFX3P48380 CR381653.2-201ENST00000624041 768 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC231657.1-201ENST00000624313 397 ntBASIC2.5□□□□□ -2.01
RFX3P48380 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.5□□□□□ -2.01
RFX3P48380 MIR4275-201ENST00000636486 87 ntBASIC2.5□□□□□ -2.01
RFX3P48380 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RFX3P48380 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFX3P48380 ZNF519P1-201ENST00000449011 1626 ntBASIC2.5□□□□□ -2.01
RFX3P48380 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX3P48380 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX3P48380 AC007785.2-201ENST00000598627 1916 ntBASIC2.49□□□□□ -2.01
RFX3P48380 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RFX3P48380 RNU6-359P-201ENST00000365466 108 ntBASIC2.49□□□□□ -2.01
RFX3P48380 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX3P48380 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
RFX3P48380 MIR122-201ENST00000385044 85 ntBASIC2.49□□□□□ -2.01
RFX3P48380 ERHP2-201ENST00000402323 299 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX3P48380 AL513175.2-201ENST00000422071 443 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AL590383.1-201ENST00000428602 75 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC112220.1-201ENST00000434628 355 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX3P48380 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 EEF1A1P39-201ENST00000440791 250 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX3P48380 RNU7-136P-201ENST00000458819 69 ntBASIC2.49□□□□□ -2.01
RFX3P48380 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
RFX3P48380 FAM172BP-201ENST00000487497 1089 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC096576.1-201ENST00000489014 359 ntBASIC2.49□□□□□ -2.01
RFX3P48380 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX3P48380 AC117522.3-201ENST00000507974 584 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC079395.1-201ENST00000510981 262 ntBASIC2.49□□□□□ -2.01
RFX3P48380 OR5BM1P-201ENST00000512021 366 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC109445.1-201ENST00000512356 383 ntBASIC2.49□□□□□ -2.01
RFX3P48380 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX3P48380 AP002748.2-201ENST00000528671 348 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX3P48380 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX3P48380 AL512347.1-201ENST00000566420 503 ntBASIC2.49□□□□□ -2.01
RFX3P48380 TMF1P1-201ENST00000576058 373 ntBASIC2.49□□□□□ -2.01
RFX3P48380 AL356575.1-201ENST00000603008 283 ntBASIC2.49□□□□□ -2.01
RFX3P48380 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX3P48380 AC024560.3-201ENST00000608482 349 ntBASIC2.49□□□□□ -2.01
RFX3P48380 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.49□□□□□ -2.01
RFX3P48380 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX3P48380 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX3P48380 AC099786.3-201ENST00000565735 1410 ntBASIC2.49□□□□□ -2.01
RFX3P48380 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX3P48380 MTCO1P9-201ENST00000505577 1534 ntBASIC2.48□□□□□ -2.01
RFX3P48380 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RFX3P48380 Y_RNA.311-201ENST00000365068 96 ntBASIC2.48□□□□□ -2.01
RFX3P48380 U3.20-201ENST00000390909 217 ntBASIC2.48□□□□□ -2.01
RFX3P48380 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
RFX3P48380 RNU6-193P-201ENST00000410977 107 ntBASIC2.48□□□□□ -2.01
RFX3P48380 BX119904.4-201ENST00000424402 301 ntBASIC2.48□□□□□ -2.01
RFX3P48380 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.48□□□□□ -2.01
RFX3P48380 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX3P48380 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX3P48380 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms