Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBEC1P41238 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 RPL21P17-201ENST00000397467 475 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AL359634.1-202ENST00000404721 284 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 HSPE1P26-201ENST00000405341 275 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 U3.39-201ENST00000408569 239 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBEC1P41238 OR2B8P-201ENST00000432841 938 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 HMGB1P12-201ENST00000438594 598 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.26□□□□□ -1.89
APOBEC1P41238 RPL21P133-201ENST00000443666 476 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC132479.1-201ENST00000449160 144 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 MTND2P24-201ENST00000453434 806 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC023598.1-201ENST00000472521 361 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBEC1P41238 RPS4XP13-201ENST00000483219 789 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 RPL9P33-201ENST00000484311 566 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC007182.2-201ENST00000489251 402 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 RPL9P6-201ENST00000492764 598 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AP001086.1-201ENST00000494882 321 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 HMGB1P29-201ENST00000505659 499 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AC105914.1-201ENST00000511798 226 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 RN7SKP18-201ENST00000516005 275 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 RNU6-445P-201ENST00000516949 107 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 IGKV2D-19-201ENST00000523346 262 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBEC1P41238 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AC005951.1-201ENST00000576706 485 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.26□□□□□ -1.89
APOBEC1P41238 MIR4644-201ENST00000579929 84 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 DEFB131E-202ENST00000602581 683 ntBASIC3.26□□□□□ -1.89
APOBEC1P41238 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBEC1P41238 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBEC1P41238 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBEC1P41238 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBEC1P41238 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 CR848007.1-201ENST00000442354 1699 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
APOBEC1P41238 RNA5SP42-201ENST00000364278 115 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 RNA5SP51-201ENST00000364750 119 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 RNU6-283P-201ENST00000364788 107 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 DEFB109C-201ENST00000382575 264 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 DEFB109B-201ENST00000382656 264 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 RNU1-39P-201ENST00000383897 165 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 Y_RNA.619-201ENST00000410951 90 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.25□□□□□ -1.89
APOBEC1P41238 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC073464.1-201ENST00000429823 534 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 MTCO2P11-201ENST00000431069 680 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL445584.1-201ENST00000431451 330 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 GPR143P-201ENST00000434155 205 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBEC1P41238 SNRPGP6-201ENST00000451124 220 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC090572.1-201ENST00000519251 160 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AP003072.2-201ENST00000527756 676 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.25□□□□□ -1.89
APOBEC1P41238 ARL2BPP2-201ENST00000550907 489 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL121576.1-201ENST00000556055 276 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC055876.1-202ENST00000567053 138 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC244505.7-201ENST00000599675 272 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.6-201ENST00000603753 252 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC010591.1-201ENST00000603941 649 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.11-201ENST00000604059 253 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC008162.1-201ENST00000604718 254 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.1-201ENST00000604752 252 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.5-201ENST00000605253 252 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.12-201ENST00000605291 253 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL136363.1-201ENST00000605349 337 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.8-201ENST00000605353 252 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AL670379.7-201ENST00000605823 252 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 AC004696.1-201ENST00000614345 607 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
APOBEC1P41238 AL158209.2-201ENST00000619266 216 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
APOBEC1P41238 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 AL672296.1-201ENST00000427780 2158 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
APOBEC1P41238 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms