Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC074250.1-201ENST00000511117 192 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AF131216.2-201ENST00000512316 564 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 RNU6-759P-201ENST00000516740 103 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 NRON-201ENST00000517270 370 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD13P35453 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD13P35453 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC005951.2-201ENST00000576282 495 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AC083760.1-201ENST00000589621 670 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AP001981.2-201ENST00000603241 418 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AC092354.1-201ENST00000606057 376 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AL355472.4-201ENST00000610233 626 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 uc_338.25-201ENST00000613756 156 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AC009159.1-201ENST00000618386 642 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 PABPC1P9-201ENST00000426076 1612 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC004972.1-201ENST00000623934 2209 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD13P35453 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD13P35453 SNORA63.1-201ENST00000362493 131 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 RNU5F-6P-201ENST00000362979 116 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 SNORA14A-201ENST00000364773 135 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HOXD13P35453 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HOXD13P35453 RPS20P2-201ENST00000402520 389 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 MTCYBP36-201ENST00000404146 440 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 RPL7P25-201ENST00000404151 721 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 RNA5SP44-201ENST00000410446 133 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 MTND2P18-201ENST00000419962 1030 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AL451054.2-201ENST00000420896 202 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 USP9YP26-201ENST00000421008 661 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AL158156.1-201ENST00000422509 473 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AL353777.1-201ENST00000425552 326 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 ELOCP23-201ENST00000452014 332 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXD13P35453 RPS20P22-201ENST00000473700 357 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXD13P35453 DSTNP2-201ENST00000504533 515 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 TTC39CP1-201ENST00000512513 755 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 AP002748.2-201ENST00000528671 348 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXD13P35453 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD13P35453 MTND3P12-201ENST00000559068 328 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXD13P35453 HMGB1P6-201ENST00000569046 646 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXD13P35453 WISP1-OT1-201ENST00000602893 642 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXD13P35453 AC103988.1-201ENST00000566382 2177 ntBASIC3.49□□□□□ -1.85
HOXD13P35453 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD13P35453 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.49□□□□□ -1.85
HOXD13P35453 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HOXD13P35453 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXD13P35453 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 PWAR6-201ENST00000552334 4618 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD13P35453 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD13P35453 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD13P35453 ELOCP17-201ENST00000414751 326 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD13P35453 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD13P35453 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD13P35453 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXD13P35453 TIMM9P1-201ENST00000436122 256 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 RPL23AP22-201ENST00000437556 453 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC005094.1-201ENST00000440420 368 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD13P35453 RPS12P18-201ENST00000442381 270 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC140076.1-201ENST00000449897 361 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXD13P35453 AC010631.1-201ENST00000474150 156 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AP000797.1-201ENST00000478870 387 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD13P35453 TRAV28-201ENST00000557548 323 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC034105.3-201ENST00000565294 442 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 MIR3146-201ENST00000580367 79 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC024220.1-201ENST00000603675 484 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 YPEL5P2-201ENST00000605553 359 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.48□□□□□ -1.85
HOXD13P35453 AC078883.4-201ENST00000623218 367 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AP003122.6-201ENST00000623831 495 ntBASIC3.48□□□□□ -1.85
HOXD13P35453 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HOXD13P35453 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms