Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.62□□□□□ -1.99
SHMT2P34897 VN1R90P-201ENST00000595717 726 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC004987.4-201ENST00000603383 338 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AC112220.3-201ENST00000605502 502 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 AP002826.1-201ENST00000608835 315 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SHMT2P34897 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SHMT2P34897 AC138915.1-201ENST00000565427 1685 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
SHMT2P34897 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.62□□□□□ -1.99
SHMT2P34897 AC091564.4-201ENST00000533934 2194 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHMT2P34897 DEFB108F-201ENST00000344638 222 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AL161781.1-201ENST00000354277 403 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 RNU6-76P-201ENST00000384060 104 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 RNU6-83P-201ENST00000384568 112 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SHMT2P34897 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SHMT2P34897 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 RPL27AP8-201ENST00000424277 446 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.61□□□□□ -1.99
SHMT2P34897 TXNL1P1-201ENST00000429528 554 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 OR4K11P-201ENST00000431829 904 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC112220.1-201ENST00000434628 355 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 MTND3P1-201ENST00000441336 220 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHMT2P34897 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 ST13P20-201ENST00000447996 1065 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC234775.1-201ENST00000454247 670 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 SNORD109B-201ENST00000458961 67 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 SNORD109A-201ENST00000459128 67 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC090525.1-201ENST00000479116 478 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC091951.3-201ENST00000504093 246 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 HMGB1P41-201ENST00000520234 440 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 MTND2P32-201ENST00000521584 1038 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 DEFB108D-201ENST00000527787 222 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.61□□□□□ -1.99
SHMT2P34897 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHMT2P34897 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SHMT2P34897 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.61□□□□□ -1.99
SHMT2P34897 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 MIR3921-201ENST00000577308 85 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC011451.2-201ENST00000604303 598 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AL035413.2-201ENST00000604801 525 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AL450336.1-201ENST00000605180 586 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 AL158211.4-201ENST00000606988 584 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC007349.4-201ENST00000608114 532 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC097478.2-201ENST00000610572 514 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AC006213.4-201ENST00000616184 634 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 AP000484.1-201ENST00000620067 1252 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SHMT2P34897 AC012321.1-201ENST00000561622 1588 ntBASIC2.61□□□□□ -1.99
SHMT2P34897 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHMT2P34897 AC062016.1-201ENST00000355719 319 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 RNU6-799P-201ENST00000363567 107 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 RNU6-289P-201ENST00000364093 107 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHMT2P34897 RNU1-109P-201ENST00000383960 147 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 RNU6-1207P-201ENST00000384343 107 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MIR513B-201ENST00000385136 84 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SHMT2P34897 FAT1P1-201ENST00000406588 507 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
SHMT2P34897 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.6□□□□□ -1.99
SHMT2P34897 SSR1P2-201ENST00000415208 787 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 PPP1R11P2-201ENST00000423543 382 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 SNRPEP7-201ENST00000438350 220 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.6□□□□□ -1.99
SHMT2P34897 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.6□□□□□ -1.99
SHMT2P34897 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.6□□□□□ -1.99
SHMT2P34897 AL590664.1-201ENST00000448065 339 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC006445.2-201ENST00000510061 472 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC024589.1-201ENST00000512207 263 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.6□□□□□ -1.99
SHMT2P34897 AC096725.1-201ENST00000514266 313 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MTCO2P15-201ENST00000532655 656 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MTND4P33-201ENST00000556706 766 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.6□□□□□ -1.99
SHMT2P34897 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.6□□□□□ -1.99
SHMT2P34897 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AL592221.1-201ENST00000605266 382 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms