Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC13P31276 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HOXC13P31276 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HOXC13P31276 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC13P31276 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC13P31276 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC13P31276 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC13P31276 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC13P31276 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 RPL5P18-201ENST00000406671 891 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 Z99755.1-201ENST00000414048 380 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC13P31276 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 MTATP6P13-201ENST00000438531 667 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 FGF7P5-201ENST00000441829 291 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 TXNP1-201ENST00000441872 371 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 AC009961.3-201ENST00000449832 765 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 RNU7-125P-201ENST00000458760 62 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 AC112198.1-201ENST00000505369 1220 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 TXNP6-201ENST00000510190 310 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC017037.2-201ENST00000513850 890 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 RNU6-1129P-201ENST00000515964 104 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 COX6CP8-201ENST00000522620 226 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC13P31276 AGGF1P4-201ENST00000568249 801 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC13P31276 AP001981.2-201ENST00000603241 418 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC017083.3-201ENST00000609955 700 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC092794.1-201ENST00000612734 582 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 AC091931.1-201ENST00000623488 728 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXC13P31276 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC13P31276 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC13P31276 AC092104.1-201ENST00000497346 1441 ntBASIC3.51□□□□□ -1.85
HOXC13P31276 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC13P31276 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC13P31276 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC13P31276 MTCO1P9-201ENST00000505577 1534 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC13P31276 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC13P31276 RNA5SP197-201ENST00000363357 119 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 SNORA80A-201ENST00000363922 136 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RNU5E-4P-201ENST00000364931 120 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HOXC13P31276 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 ELOCP17-201ENST00000414751 326 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 ISCA1P2-201ENST00000438679 421 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 AC104090.1-201ENST00000506341 1171 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 LTV1P1-201ENST00000510683 1237 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RNA5SP341-201ENST00000516261 117 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RNU6-714P-201ENST00000516963 103 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC13P31276 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AL133241.1-201ENST00000556832 487 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 TGIF1P1-201ENST00000558095 802 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AC135628.1-201ENST00000568867 534 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 MIR4325-201ENST00000583049 90 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AC105224.1-201ENST00000587055 421 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC13P31276 AC078795.2-201ENST00000602835 1252 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AL590229.1-201ENST00000603497 542 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AC073648.5-201ENST00000603502 305 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 AL162713.1-201ENST00000604480 262 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RN7SKP299-201ENST00000606679 301 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 RNVU1-4-201ENST00000612985 164 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 ATP5A1P2-202ENST00000616464 443 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 AL390237.1-201ENST00000404226 1415 ntBASIC3.5□□□□□ -1.85
HOXC13P31276 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HOXC13P31276 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC13P31276 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC13P31276 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC13P31276 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC13P31276 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC13P31276 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC13P31276 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC13P31276 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC13P31276 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC13P31276 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC13P31276 Y_RNA.77-201ENST00000362962 107 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms