Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC128657.1-201ENST00000549459 145 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
CAPN3P20807 AL022161.1-201ENST00000604390 213 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC105129.3-201ENST00000605455 485 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 RNU6-87P-201ENST00000607561 108 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC107294.1-201ENST00000609524 467 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 BX664608.1-201ENST00000610519 487 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC005344.1-201ENST00000613391 459 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AL442067.2-201ENST00000614033 363 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC027807.2-201ENST00000616099 408 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 AC091931.1-201ENST00000623488 728 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.52□□□□□ -1.85
CAPN3P20807 AC092435.3-201ENST00000565538 3654 ntBASIC3.52□□□□□ -1.85
CAPN3P20807 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CAPN3P20807 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.51□□□□□ -1.85
CAPN3P20807 MTND5P29-201ENST00000458676 1807 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CAPN3P20807 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CAPN3P20807 MIR30B-201ENST00000384850 88 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 RNU2-8P-201ENST00000410727 190 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.51□□□□□ -1.85
CAPN3P20807 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 USP9YP13-201ENST00000417797 480 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 BTF3L4P3-201ENST00000418879 476 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 RAC1P6-201ENST00000423911 575 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 HMGN2P31-201ENST00000432430 273 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
CAPN3P20807 UBE2D3P4-201ENST00000441973 436 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 AC116337.2-201ENST00000477662 156 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 RN7SL432P-201ENST00000484057 298 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC109486.1-201ENST00000486833 374 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC114797.1-201ENST00000514003 728 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AL592295.2-201ENST00000612578 206 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC034102.8-201ENST00000615146 484 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC009878.1-201ENST00000621819 340 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC068880.5-201ENST00000624331 290 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 AL732372.2-225ENST00000642124 456 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
CAPN3P20807 AP003122.5-201ENST00000527668 3766 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CAPN3P20807 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CAPN3P20807 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.51□□□□□ -1.85
CAPN3P20807 MTND4P4-201ENST00000439033 1366 ntBASIC3.51□□□□□ -1.85
CAPN3P20807 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.5□□□□□ -1.85
CAPN3P20807 MTCO1P12-201ENST00000414273 1543 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CAPN3P20807 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CAPN3P20807 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CAPN3P20807 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CAPN3P20807 RNA5SP354-201ENST00000391247 136 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 NDUFS5P1-201ENST00000405668 289 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 ZNF90P2-204ENST00000419323 1075 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AL139247.1-201ENST00000422768 325 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC019097.1-201ENST00000424783 735 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.5□□□□□ -1.85
CAPN3P20807 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.5□□□□□ -1.85
CAPN3P20807 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.5□□□□□ -1.85
CAPN3P20807 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 DDX3P2-201ENST00000446138 111 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 RPS29P12-201ENST00000460178 152 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 ARL4AP2-201ENST00000507378 601 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC022878.1-201ENST00000530684 149 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.5□□□□□ -1.85
CAPN3P20807 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
CAPN3P20807 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.5□□□□□ -1.85
CAPN3P20807 MIR5697-201ENST00000578045 78 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.5□□□□□ -1.85
CAPN3P20807 AC008507.1-201ENST00000587506 734 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.5□□□□□ -1.85
CAPN3P20807 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC136601.2-201ENST00000604356 474 ntBASIC3.5□□□□□ -1.85
CAPN3P20807 AC112191.3-201ENST00000604371 277 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms