Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC233728.2-201ENST00000425348 757 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXC6P09630 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 RABEPKP1-201ENST00000440529 1026 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AC104073.1-201ENST00000451988 151 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC022861.1-201ENST00000522981 663 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 AP002404.1-201ENST00000532005 451 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 AL391840.1-201ENST00000571144 367 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC067852.4-201ENST00000590314 478 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXC6P09630 AC011451.2-201ENST00000604303 598 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AL365503.1-201ENST00000605247 905 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC6P09630 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXC6P09630 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 AC018692.3-201ENST00000623929 123 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXC6P09630 LRRC77P-213ENST00000637727 880 ntBASIC3.73□□□□□ -1.81
HOXC6P09630 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC6P09630 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC6P09630 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC6P09630 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC6P09630 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXC6P09630 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HOXC6P09630 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXC6P09630 FARSBP1-201ENST00000435808 1778 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 RNU6-1090P-201ENST00000364065 94 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 RNU6-744P-201ENST00000365557 107 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 RNU6-1316P-201ENST00000384242 108 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 SNORA7.4-201ENST00000384249 137 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC069218.2-201ENST00000411665 344 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 RPS3AP9-201ENST00000417027 792 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC6P09630 AL109913.1-201ENST00000421173 514 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 RPL23AP69-201ENST00000431134 458 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC6P09630 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC6P09630 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC105402.2-201ENST00000438503 358 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 FAM103A2P-201ENST00000444122 354 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC079448.1-201ENST00000449377 373 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC140076.1-201ENST00000449897 361 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 RPL31P58-201ENST00000469001 379 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC6P09630 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC6P09630 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
HOXC6P09630 RNU6-1003P-201ENST00000517099 105 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXC6P09630 HSPA8P13-201ENST00000523715 472 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC6P09630 AL121579.1-201ENST00000555129 305 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC034105.3-201ENST00000565294 442 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AC015917.1-201ENST00000579654 510 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC004067.1-201ENST00000608733 700 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 AL592295.2-201ENST00000612578 206 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXC6P09630 AC068722.2-201ENST00000618734 544 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC6P09630 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC6P09630 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXC6P09630 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXC6P09630 AL049780.3-201ENST00000624612 1583 ntBASIC3.72□□□□□ -1.81
HOXC6P09630 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
HOXC6P09630 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXC6P09630 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HOXC6P09630 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXC6P09630 Y_RNA.46-201ENST00000362695 102 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 RNU6-1243P-201ENST00000364028 107 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 Y_RNA.453-201ENST00000384223 109 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 SNORD115.1-201ENST00000391109 76 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 AL136116.1-201ENST00000403591 381 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 RNU4-55P-201ENST00000410731 137 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC6P09630 MTCYBP24-201ENST00000420387 1106 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXC6P09630 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC6P09630 FCF1P1-201ENST00000432690 571 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 MTCYBP45-201ENST00000435243 565 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXC6P09630 HMGB1P31-201ENST00000437242 427 ntBASIC3.71□□□□□ -1.82
HOXC6P09630 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms