Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Y_RNA.72-201ENST00000362894 103 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 RNU6-1120P-201ENST00000362988 108 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 RNA5SP50-201ENST00000363731 107 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DOAP06340 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AL122016.1-201ENST00000403365 367 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AL354719.1-201ENST00000406535 843 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 AP000907.1-201ENST00000428428 510 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 MRPL50P4-201ENST00000446432 475 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AP1S2P1-201ENST00000457344 379 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 RNU6-261P-201ENST00000459506 102 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC093278.1-201ENST00000494700 600 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 MTCO3P9-201ENST00000506989 781 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC074250.1-201ENST00000511117 192 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC107953.1-201ENST00000522216 297 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 MIR3146-201ENST00000580367 79 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC060771.1-201ENST00000582031 164 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC112204.3-201ENST00000623822 332 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DOAP06340 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DOAP06340 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DOAP06340 PHKBP1-201ENST00000450951 1951 ntBASIC4.29□□□□□ -1.72
HLA-DOAP06340 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DOAP06340 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DOAP06340 RNU6-97P-201ENST00000363387 104 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 RNU6-39P-201ENST00000384344 107 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 MIR23A-201ENST00000385245 73 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AL162578.1-201ENST00000406202 378 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 RNA5SP104-201ENST00000410989 118 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 RPS20P15-201ENST00000412792 311 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 GPR143P-201ENST00000434155 205 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 RPS20P1-201ENST00000434853 354 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 FTH1P1-201ENST00000437933 532 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 PPIAP3-201ENST00000450588 505 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 snoU13.8-201ENST00000458890 104 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC069499.1-201ENST00000489433 509 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AP003497.1-201ENST00000528472 562 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC107016.1-201ENST00000550463 337 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC090615.1-201ENST00000577519 154 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 MIR4512-201ENST00000583257 77 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC007566.2-201ENST00000603642 413 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC096577.2-201ENST00000611455 153 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 DISC2.1-201ENST00000612827 205 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AL596245.1-201ENST00000618994 362 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC090617.10-201ENST00000624308 134 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 AL159972.1-201ENST00000625150 448 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AL049781.1-201ENST00000623195 3585 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
HLA-DOAP06340 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DOAP06340 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
HLA-DOAP06340 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 NACAP2-201ENST00000318548 624 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DOAP06340 RNA5SP258-201ENST00000362750 119 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 SNORA32.2-201ENST00000384049 122 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 RNU6-74P-201ENST00000384235 107 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 AL354751.2-201ENST00000415471 210 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 BX842559.1-201ENST00000419615 532 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 AL138785.1-201ENST00000425821 331 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 RPL23AP83-201ENST00000434984 473 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 CBWD4P-201ENST00000445695 655 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 EIF4EP3-201ENST00000498782 656 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 FGF7P4-201ENST00000509595 295 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 SNORA70.18-201ENST00000516696 98 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 SUB1P1-201ENST00000524415 382 ntBASIC4.27□□□□□ -1.73
HLA-DOAP06340 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DOAP06340 AC098848.2-201ENST00000588023 330 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms