Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOEP02649 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOEP02649 CENPCP1-201ENST00000533085 2578 ntBASIC2.18□□□□□ -2.06
APOEP02649 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.18□□□□□ -2.06
APOEP02649 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
APOEP02649 AP002784.2-201ENST00000397300 549 ntBASIC2.18□□□□□ -2.06
APOEP02649 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.18□□□□□ -2.06
APOEP02649 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
APOEP02649 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.18□□□□□ -2.06
APOEP02649 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.18□□□□□ -2.06
APOEP02649 AL358075.3-201ENST00000426289 226 ntBASIC2.18□□□□□ -2.06
APOEP02649 MTCO3P30-201ENST00000426425 670 ntBASIC2.18□□□□□ -2.06
APOEP02649 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
APOEP02649 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.18□□□□□ -2.06
APOEP02649 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 AC007000.2-201ENST00000442564 487 ntBASIC2.18□□□□□ -2.06
APOEP02649 GPM6BP3-201ENST00000442797 145 ntBASIC2.18□□□□□ -2.06
APOEP02649 AL591719.1-201ENST00000444669 744 ntBASIC2.18□□□□□ -2.06
APOEP02649 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 RNU7-23P-201ENST00000459465 62 ntBASIC2.18□□□□□ -2.06
APOEP02649 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 AC027807.1-201ENST00000559921 996 ntBASIC2.18□□□□□ -2.06
APOEP02649 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.18□□□□□ -2.06
APOEP02649 AC079791.1-201ENST00000605356 973 ntBASIC2.18□□□□□ -2.06
APOEP02649 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.18□□□□□ -2.06
APOEP02649 OR10AB1P-201ENST00000609613 938 ntBASIC2.18□□□□□ -2.06
APOEP02649 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.18□□□□□ -2.06
APOEP02649 AC087241.4-201ENST00000612441 480 ntBASIC2.18□□□□□ -2.06
APOEP02649 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.18□□□□□ -2.06
APOEP02649 AL162233.1-201ENST00000620014 944 ntBASIC2.18□□□□□ -2.06
APOEP02649 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.18□□□□□ -2.06
APOEP02649 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOEP02649 MTND4P1-201ENST00000457501 1466 ntBASIC2.18□□□□□ -2.06
APOEP02649 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.18□□□□□ -2.06
APOEP02649 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOEP02649 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOEP02649 SGO1P1-201ENST00000603525 1447 ntBASIC2.17□□□□□ -2.06
APOEP02649 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 RNU6-619P-201ENST00000365146 108 ntBASIC2.17□□□□□ -2.06
APOEP02649 RNU6-1035P-201ENST00000384477 107 ntBASIC2.17□□□□□ -2.06
APOEP02649 MIR16-1-201ENST00000385271 89 ntBASIC2.17□□□□□ -2.06
APOEP02649 AC099548.1-201ENST00000421443 426 ntBASIC2.17□□□□□ -2.06
APOEP02649 AC114878.1-201ENST00000441166 358 ntBASIC2.17□□□□□ -2.06
APOEP02649 FGF7P5-201ENST00000441829 291 ntBASIC2.17□□□□□ -2.06
APOEP02649 RFC5P1-201ENST00000454419 874 ntBASIC2.17□□□□□ -2.06
APOEP02649 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 OR4G11P-201ENST00000492842 939 ntBASIC2.17□□□□□ -2.06
APOEP02649 RNU1-41P-201ENST00000516161 162 ntBASIC2.17□□□□□ -2.06
APOEP02649 RNU1-48P-201ENST00000516400 162 ntBASIC2.17□□□□□ -2.06
APOEP02649 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.17□□□□□ -2.06
APOEP02649 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.17□□□□□ -2.06
APOEP02649 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.17□□□□□ -2.06
APOEP02649 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.17□□□□□ -2.06
APOEP02649 MIR3921-201ENST00000577308 85 ntBASIC2.17□□□□□ -2.06
APOEP02649 OR4K8P-201ENST00000578842 1048 ntBASIC2.17□□□□□ -2.06
APOEP02649 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 AL592148.2-201ENST00000612210 372 ntBASIC2.17□□□□□ -2.06
APOEP02649 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOEP02649 AL450472.3-201ENST00000615578 367 ntBASIC2.17□□□□□ -2.06
APOEP02649 AC090132.2-201ENST00000615881 347 ntBASIC2.17□□□□□ -2.06
APOEP02649 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 AC110994.2-201ENST00000635481 492 ntBASIC2.17□□□□□ -2.06
APOEP02649 MIR7515-201ENST00000637837 67 ntBASIC2.17□□□□□ -2.06
APOEP02649 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.17□□□□□ -2.06
APOEP02649 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
APOEP02649 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOEP02649 MTCO1P23-201ENST00000415223 1526 ntBASIC2.17□□□□□ -2.06
APOEP02649 GDI2P1-201ENST00000429312 1336 ntBASIC2.17□□□□□ -2.06
APOEP02649 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
APOEP02649 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
APOEP02649 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
APOEP02649 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
APOEP02649 FCF1P2-201ENST00000415284 583 ntBASIC2.16□□□□□ -2.06
APOEP02649 Z98742.2-201ENST00000431564 187 ntBASIC2.16□□□□□ -2.06
APOEP02649 MTND4LP7-201ENST00000431728 294 ntBASIC2.16□□□□□ -2.06
APOEP02649 RPL26P6-201ENST00000440913 438 ntBASIC2.16□□□□□ -2.06
APOEP02649 AC009237.8-201ENST00000445492 379 ntBASIC2.16□□□□□ -2.06
APOEP02649 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
APOEP02649 AC107626.1-201ENST00000471084 183 ntBASIC2.16□□□□□ -2.06
APOEP02649 AC113420.1-201ENST00000507903 571 ntBASIC2.16□□□□□ -2.06
APOEP02649 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.16□□□□□ -2.06
APOEP02649 HSPE1P18-201ENST00000517602 280 ntBASIC2.16□□□□□ -2.06
APOEP02649 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
APOEP02649 AC068339.2-201ENST00000534395 618 ntBASIC2.16□□□□□ -2.06
APOEP02649 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.16□□□□□ -2.06
APOEP02649 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.16□□□□□ -2.06
APOEP02649 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.16□□□□□ -2.06
APOEP02649 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.16□□□□□ -2.06
APOEP02649 AC106730.3-201ENST00000624568 641 ntBASIC2.16□□□□□ -2.06
APOEP02649 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
APOEP02649 MFSD8-213ENST00000641134 1327 ntBASIC2.16□□□□□ -2.06
APOEP02649 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
APOEP02649 AL139098.1-201ENST00000407291 389 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
APOEP02649 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.15□□□□□ -2.07
APOEP02649 COX6CP12-201ENST00000446748 202 ntBASIC2.15□□□□□ -2.07
APOEP02649 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms