Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL357559.1-201ENST00000622228 274 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC022418.1-201ENST00000624118 445 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC008013.2-202ENST00000637965 364 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 AC139713.2-214ENST00000642059 1811 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC107068.1-201ENST00000563286 4218 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNOT4O95628 GABPAP-201ENST00000419271 1356 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CNOT4O95628 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CNOT4O95628 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CNOT4O95628 RNU6-61P-201ENST00000365528 109 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 RNU6-1074P-201ENST00000383995 104 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 SNORA24.1-201ENST00000384401 135 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 Y_RNA.576-201ENST00000384781 102 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 RNU4-46P-201ENST00000410818 138 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 TOMM22P1-201ENST00000418578 312 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNOT4O95628 NRBF2P3-201ENST00000432731 865 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AL451139.1-201ENST00000434718 346 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AL121871.1-201ENST00000443413 436 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC000111.2-201ENST00000448200 210 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 DHFRP3-201ENST00000455595 559 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.29□□□□□ -1.72
CNOT4O95628 RPL36AP13-201ENST00000457490 317 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 MIR2053-201ENST00000459295 91 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 RPS23P7-201ENST00000466210 444 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNOT4O95628 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.29□□□□□ -1.72
CNOT4O95628 AP001086.1-201ENST00000494882 321 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 HMGB3P16-201ENST00000508037 287 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 RNU1-6P-201ENST00000516290 144 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 RNU6-64P-201ENST00000517119 105 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.29□□□□□ -1.72
CNOT4O95628 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 CR383656.7-201ENST00000548164 174 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
CNOT4O95628 OR11H5P-201ENST00000554039 926 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 PARP1P2-201ENST00000556806 195 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.29□□□□□ -1.72
CNOT4O95628 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.29□□□□□ -1.72
CNOT4O95628 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.29□□□□□ -1.72
CNOT4O95628 AC012669.1-201ENST00000603209 283 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC011373.1-201ENST00000607270 237 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC012409.4-201ENST00000612923 249 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 AC055839.1-201ENST00000634467 498 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 MFSD8-216ENST00000641147 4009 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNOT4O95628 AC126323.6-202ENST00000568092 3511 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.29□□□□□ -1.72
CNOT4O95628 AL049641.1-201ENST00000441055 1948 ntBASIC4.29□□□□□ -1.72
CNOT4O95628 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.28□□□□□ -1.72
CNOT4O95628 AL672167.1-204ENST00000641875 3017 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNOT4O95628 A2MP1-204ENST00000566278 4130 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CNOT4O95628 AC126755.2-208ENST00000327792 462 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC138969.1-213ENST00000331436 462 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RNU6-188P-201ENST00000364207 107 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RNU6-1078P-201ENST00000364522 103 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNOT4O95628 RNU6-505P-201ENST00000384427 107 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CNOT4O95628 HSPE1P26-201ENST00000405341 275 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RNU2-47P-201ENST00000410649 186 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC114491.1-201ENST00000416095 246 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 TBCAP2-201ENST00000416175 326 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC099677.1-201ENST00000420575 175 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RPL23AP38-201ENST00000423801 469 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RPL7P46-201ENST00000425129 740 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AL731563.1-201ENST00000442202 214 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.28□□□□□ -1.72
CNOT4O95628 snoU13.24-201ENST00000458998 104 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.28□□□□□ -1.72
CNOT4O95628 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.28□□□□□ -1.72
CNOT4O95628 RN7SL558P-201ENST00000497468 299 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 MLLT10P2-201ENST00000506434 249 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC079140.5-201ENST00000507882 310 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC104806.1-201ENST00000508720 308 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 RNU6-123P-201ENST00000516163 102 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms