Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RNA5SP88-201ENST00000365560 109 ntBASIC1.25□□□□□ -2.21
SIX6O95475 RNA5SP270-201ENST00000411361 118 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.25□□□□□ -2.21
SIX6O95475 AL161449.1-201ENST00000414531 1199 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AL445669.1-201ENST00000426743 755 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.25□□□□□ -2.21
SIX6O95475 GTF2IP20-201ENST00000431663 360 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC236972.1-201ENST00000433225 199 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC004383.1-201ENST00000438135 289 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AL500527.1-201ENST00000448532 255 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.25□□□□□ -2.21
SIX6O95475 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.25□□□□□ -2.21
SIX6O95475 RNU7-23P-201ENST00000459465 62 ntBASIC1.25□□□□□ -2.21
SIX6O95475 RPL31P50-201ENST00000471002 296 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.25□□□□□ -2.21
SIX6O95475 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.25□□□□□ -2.21
SIX6O95475 Y_RNA.675-201ENST00000516389 149 ntBASIC1.25□□□□□ -2.21
SIX6O95475 RNU6-928P-201ENST00000516876 104 ntBASIC1.25□□□□□ -2.21
SIX6O95475 HSPE1P18-201ENST00000517602 280 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.25□□□□□ -2.21
SIX6O95475 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.25□□□□□ -2.21
SIX6O95475 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.25□□□□□ -2.21
SIX6O95475 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.25□□□□□ -2.21
SIX6O95475 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
SIX6O95475 AC078899.2-201ENST00000595282 212 ntBASIC1.25□□□□□ -2.21
SIX6O95475 RPAP2P1-201ENST00000603626 1168 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC068313.1-201ENST00000604028 1008 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AP002826.1-201ENST00000608835 315 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AL136981.2-201ENST00000617319 734 ntBASIC1.25□□□□□ -2.21
SIX6O95475 AC011330.2-201ENST00000621680 635 ntBASIC1.25□□□□□ -2.21
SIX6O95475 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SIX6O95475 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SIX6O95475 AL356473.1-201ENST00000406203 1408 ntBASIC1.24□□□□□ -2.21
SIX6O95475 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.24□□□□□ -2.21
SIX6O95475 RNU6-270P-201ENST00000364131 105 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AL136372.1-201ENST00000403060 228 ntBASIC1.24□□□□□ -2.21
SIX6O95475 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.24□□□□□ -2.21
SIX6O95475 USP9YP6-201ENST00000413550 854 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 Z98742.3-201ENST00000418637 326 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 BX510359.4-201ENST00000423750 193 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC090774.1-201ENST00000435925 246 ntBASIC1.24□□□□□ -2.21
SIX6O95475 HSPE1P21-201ENST00000438283 308 ntBASIC1.24□□□□□ -2.21
SIX6O95475 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 AC005297.2-201ENST00000450430 606 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC233982.1-201ENST00000451247 436 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.24□□□□□ -2.21
SIX6O95475 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC005410.1-202ENST00000460347 485 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC017007.3-201ENST00000479865 435 ntBASIC1.24□□□□□ -2.21
SIX6O95475 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 KATNBL1P4-201ENST00000503545 918 ntBASIC1.24□□□□□ -2.21
SIX6O95475 MTCYBP35-201ENST00000503630 1137 ntBASIC1.24□□□□□ -2.21
SIX6O95475 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.24□□□□□ -2.21
SIX6O95475 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.24□□□□□ -2.21
SIX6O95475 SNORA31.25-201ENST00000517242 134 ntBASIC1.24□□□□□ -2.21
SIX6O95475 RNU2-19P-201ENST00000517288 84 ntBASIC1.24□□□□□ -2.21
SIX6O95475 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SIX6O95475 AP002770.2-201ENST00000543613 532 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.24□□□□□ -2.21
SIX6O95475 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.24□□□□□ -2.21
SIX6O95475 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.24□□□□□ -2.21
SIX6O95475 AC068135.2-201ENST00000569293 1028 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC025165.5-201ENST00000602802 578 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC012669.1-201ENST00000603209 283 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC005034.5-201ENST00000604219 466 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC025588.2-201ENST00000604851 466 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC110792.4-201ENST00000609843 298 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC109454.4-201ENST00000623411 649 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC073308.1-201ENST00000623696 305 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC080128.1-201ENST00000474389 1917 ntBASIC1.24□□□□□ -2.21
SIX6O95475 AC006026.1-201ENST00000444025 1803 ntBASIC1.24□□□□□ -2.21
SIX6O95475 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SIX6O95475 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SIX6O95475 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SIX6O95475 Z98749.2-208ENST00000381646 500 ntBASIC1.23□□□□□ -2.21
SIX6O95475 SNORA40.18-201ENST00000391200 128 ntBASIC1.23□□□□□ -2.21
SIX6O95475 CISD1P1-201ENST00000393907 327 ntBASIC1.23□□□□□ -2.21
SIX6O95475 CYCSP48-201ENST00000417124 323 ntBASIC1.23□□□□□ -2.21
SIX6O95475 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.23□□□□□ -2.21
SIX6O95475 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.23□□□□□ -2.21
SIX6O95475 RPL27AP8-201ENST00000424277 446 ntBASIC1.23□□□□□ -2.21
SIX6O95475 FABP5P3-201ENST00000437960 408 ntBASIC1.23□□□□□ -2.21
SIX6O95475 RPL7P54-201ENST00000438336 674 ntBASIC1.23□□□□□ -2.21
SIX6O95475 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.23□□□□□ -2.21
SIX6O95475 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.23□□□□□ -2.21
SIX6O95475 AL589880.1-201ENST00000448271 287 ntBASIC1.23□□□□□ -2.21
SIX6O95475 DYNLL1P5-201ENST00000467158 270 ntBASIC1.23□□□□□ -2.21
SIX6O95475 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.23□□□□□ -2.21
SIX6O95475 PCNAP1-201ENST00000505363 709 ntBASIC1.23□□□□□ -2.21
SIX6O95475 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SIX6O95475 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.23□□□□□ -2.21
SIX6O95475 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.23□□□□□ -2.21
SIX6O95475 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SIX6O95475 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.23□□□□□ -2.21
SIX6O95475 AC106734.1-201ENST00000568646 663 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms