Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL137100.2-201ENST00000555786 315 ntBASIC2.59□□□□□ -1.99
PCF11O94913 AC011712.1-201ENST00000588959 234 ntBASIC2.59□□□□□ -1.99
PCF11O94913 AL391646.1-201ENST00000603860 190 ntBASIC2.59□□□□□ -1.99
PCF11O94913 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCF11O94913 AC007275.1-201ENST00000621243 671 ntBASIC2.59□□□□□ -1.99
PCF11O94913 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.59□□□□□ -1.99
PCF11O94913 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.59□□□□□ -2
PCF11O94913 OR4G11P-202ENST00000642116 1414 ntBASIC2.59□□□□□ -2
PCF11O94913 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
PCF11O94913 RNU6-1243P-201ENST00000364028 107 ntBASIC2.58□□□□□ -2
PCF11O94913 CD24P4-201ENST00000382840 243 ntBASIC2.58□□□□□ -2
PCF11O94913 MIR625-201ENST00000385047 85 ntBASIC2.58□□□□□ -2
PCF11O94913 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.58□□□□□ -2
PCF11O94913 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.58□□□□□ -2
PCF11O94913 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.58□□□□□ -2
PCF11O94913 MIR4421-201ENST00000578133 69 ntBASIC2.58□□□□□ -2
PCF11O94913 ZNF876P-202ENST00000398732 1485 ntBASIC2.58□□□□□ -2
PCF11O94913 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.58□□□□□ -2
PCF11O94913 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
PCF11O94913 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCF11O94913 SNORA7.1-201ENST00000363750 139 ntBASIC2.57□□□□□ -2
PCF11O94913 RNU6-670P-201ENST00000364312 104 ntBASIC2.57□□□□□ -2
PCF11O94913 Z98749.2-208ENST00000381646 500 ntBASIC2.57□□□□□ -2
PCF11O94913 MTATP6P31-201ENST00000406985 692 ntBASIC2.57□□□□□ -2
PCF11O94913 PAICSP7-201ENST00000419829 962 ntBASIC2.57□□□□□ -2
PCF11O94913 ARPC3P1-201ENST00000437218 533 ntBASIC2.57□□□□□ -2
PCF11O94913 KATNBL1P4-201ENST00000503545 918 ntBASIC2.57□□□□□ -2
PCF11O94913 PCNAP1-201ENST00000505363 709 ntBASIC2.57□□□□□ -2
PCF11O94913 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.57□□□□□ -2
PCF11O94913 RNU6-1223P-201ENST00000517124 104 ntBASIC2.57□□□□□ -2
PCF11O94913 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.57□□□□□ -2
PCF11O94913 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.57□□□□□ -2
PCF11O94913 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.57□□□□□ -2
PCF11O94913 AL138880.2-201ENST00000616214 239 ntBASIC2.57□□□□□ -2
PCF11O94913 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PCF11O94913 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PCF11O94913 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.57□□□□□ -2
PCF11O94913 BNIP3P2-201ENST00000441221 577 ntBASIC2.57□□□□□ -2
PCF11O94913 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.57□□□□□ -2
PCF11O94913 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.57□□□□□ -2
PCF11O94913 AC115989.2-201ENST00000578640 563 ntBASIC2.57□□□□□ -2
PCF11O94913 AC005730.3-201ENST00000583067 366 ntBASIC2.57□□□□□ -2
PCF11O94913 MIR3935-201ENST00000583472 104 ntBASIC2.57□□□□□ -2
PCF11O94913 AC008083.4-201ENST00000615076 444 ntBASIC2.57□□□□□ -2
PCF11O94913 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.56□□□□□ -2
PCF11O94913 RNU1-93P-201ENST00000364704 169 ntBASIC2.56□□□□□ -2
PCF11O94913 PRRC2CP1-201ENST00000404428 159 ntBASIC2.56□□□□□ -2
PCF11O94913 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCF11O94913 MTCYBP34-201ENST00000439552 670 ntBASIC2.56□□□□□ -2
PCF11O94913 RABEPKP1-201ENST00000440529 1026 ntBASIC2.56□□□□□ -2
PCF11O94913 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.56□□□□□ -2
PCF11O94913 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.56□□□□□ -2
PCF11O94913 snoU13.3-201ENST00000459441 104 ntBASIC2.56□□□□□ -2
PCF11O94913 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.56□□□□□ -2
PCF11O94913 SNORA31.20-201ENST00000517111 133 ntBASIC2.56□□□□□ -2
PCF11O94913 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.56□□□□□ -2
PCF11O94913 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.56□□□□□ -2
PCF11O94913 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.56□□□□□ -2
PCF11O94913 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.56□□□□□ -2
PCF11O94913 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
PCF11O94913 MIR6076-201ENST00000617521 113 ntBASIC2.56□□□□□ -2
PCF11O94913 SNHG22-203ENST00000617833 660 ntBASIC2.56□□□□□ -2
PCF11O94913 DUXAP9-208ENST00000622815 614 ntBASIC2.56□□□□□ -2
PCF11O94913 AP000676.4-201ENST00000624659 623 ntBASIC2.56□□□□□ -2
PCF11O94913 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCF11O94913 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.56□□□□□ -2
PCF11O94913 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
PCF11O94913 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.55□□□□□ -2
PCF11O94913 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.55□□□□□ -2
PCF11O94913 SRIP3-201ENST00000413200 219 ntBASIC2.55□□□□□ -2
PCF11O94913 MTCO3P12-201ENST00000416718 547 ntBASIC2.55□□□□□ -2
PCF11O94913 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.55□□□□□ -2
PCF11O94913 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
PCF11O94913 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.55□□□□□ -2
PCF11O94913 RNU6-491P-201ENST00000516099 110 ntBASIC2.55□□□□□ -2
PCF11O94913 OSBPL9P3-201ENST00000534523 595 ntBASIC2.55□□□□□ -2
PCF11O94913 AC138473.1-201ENST00000605717 526 ntBASIC2.55□□□□□ -2
PCF11O94913 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.55□□□□□ -2
PCF11O94913 MT-TC-201ENST00000387405 66 ntBASIC2.54□□□□□ -2
PCF11O94913 AL136133.1-201ENST00000413694 376 ntBASIC2.54□□□□□ -2
PCF11O94913 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.54□□□□□ -2
PCF11O94913 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.54□□□□□ -2
PCF11O94913 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.54□□□□□ -2
PCF11O94913 Z96811.1-201ENST00000445880 108 ntBASIC2.54□□□□□ -2
PCF11O94913 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
PCF11O94913 RNF138P1-201ENST00000502765 546 ntBASIC2.54□□□□□ -2
PCF11O94913 SNORA31.8-201ENST00000516327 108 ntBASIC2.54□□□□□ -2
PCF11O94913 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
PCF11O94913 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.54□□□□□ -2
PCF11O94913 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.54□□□□□ -2
PCF11O94913 MIR151B-201ENST00000584249 96 ntBASIC2.54□□□□□ -2
PCF11O94913 MIR4448-201ENST00000584360 86 ntBASIC2.54□□□□□ -2
PCF11O94913 DPRXP5-201ENST00000604662 539 ntBASIC2.54□□□□□ -2
PCF11O94913 AC106791.2-201ENST00000604680 391 ntBASIC2.54□□□□□ -2
PCF11O94913 AL157834.3-201ENST00000615543 103 ntBASIC2.54□□□□□ -2
PCF11O94913 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PCF11O94913 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PCF11O94913 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.53□□□□□ -2
PCF11O94913 AC073264.1-201ENST00000411508 416 ntBASIC2.53□□□□□ -2
PCF11O94913 OFD1P18Y-201ENST00000420889 959 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms