Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC006548.1-201ENST00000427470 102 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP4O75161 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP4O75161 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP4O75161 HMGN3P1-201ENST00000453847 193 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 MTCO3P35-201ENST00000485582 781 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 GZMAP1-201ENST00000503054 631 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 AP000790.1-201ENST00000528891 737 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 AC124293.1-201ENST00000530034 493 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 OR8K4P-201ENST00000534608 872 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPHP4O75161 AC079148.1-201ENST00000565944 819 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.62□□□□□ -1.99
NPHP4O75161 AC133794.1-201ENST00000602731 914 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 AC092474.3-201ENST00000603022 568 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 CR381572.1-201ENST00000625098 102 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 AL590396.4-201ENST00000636779 956 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 MTND2P41-201ENST00000637599 773 ntBASIC2.62□□□□□ -1.99
NPHP4O75161 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPHP4O75161 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NPHP4O75161 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPHP4O75161 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NPHP4O75161 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.61□□□□□ -1.99
NPHP4O75161 RNU6-50P-201ENST00000362356 103 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
NPHP4O75161 GTF2IP12-201ENST00000456547 356 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 snoU13.4-201ENST00000458916 104 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 RPL21P104-201ENST00000464143 478 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AC104435.1-201ENST00000483483 166 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.61□□□□□ -1.99
NPHP4O75161 ARL4AP2-201ENST00000507378 601 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AC239860.2-201ENST00000525886 270 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AL512598.1-201ENST00000610158 273 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AC073968.1-201ENST00000618594 637 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 AC097460.3-201ENST00000623099 442 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.61□□□□□ -1.99
NPHP4O75161 AC130650.2-201ENST00000618736 2403 ntBASIC2.61□□□□□ -1.99
NPHP4O75161 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NPHP4O75161 AL591034.1-201ENST00000407447 340 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 MTND1P23-201ENST00000416931 372 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP4O75161 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NPHP4O75161 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHP4O75161 FO393414.1-201ENST00000428697 1184 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 RPL31P54-201ENST00000429803 370 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.6□□□□□ -1.99
NPHP4O75161 RNU7-140P-201ENST00000459546 60 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.6□□□□□ -1.99
NPHP4O75161 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.6□□□□□ -1.99
NPHP4O75161 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP4O75161 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.6□□□□□ -1.99
NPHP4O75161 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP4O75161 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP4O75161 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHP4O75161 MTCO1P40-201ENST00000574371 625 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AC026741.1-201ENST00000605892 482 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AL110115.1-201ENST00000614396 364 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 AC040168.1-201ENST00000623594 991 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHP4O75161 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
NPHP4O75161 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NPHP4O75161 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NPHP4O75161 OR1L1-202ENST00000373686 1083 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NPHP4O75161 RNU6-730P-201ENST00000383954 104 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 PTGES3P2-201ENST00000407942 482 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 UBE2D3P2-201ENST00000424409 445 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC234064.1-201ENST00000436312 247 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AL353718.1-201ENST00000451028 517 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AL137159.1-201ENST00000452808 512 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 NDUFA5P7-201ENST00000452914 242 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 BX322784.1-201ENST00000455793 1077 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC104472.2-201ENST00000469035 601 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.59□□□□□ -1.99
NPHP4O75161 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.59□□□□□ -1.99
NPHP4O75161 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
NPHP4O75161 TTC39CP1-201ENST00000512513 755 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 RNA5SP468-201ENST00000516782 93 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.59□□□□□ -1.99
NPHP4O75161 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -1.99
NPHP4O75161 OR4P1P-201ENST00000530808 1136 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.59□□□□□ -1.99
NPHP4O75161 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.59□□□□□ -1.99
NPHP4O75161 AC012669.1-201ENST00000603209 283 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC006329.2-201ENST00000611491 394 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC095031.1-201ENST00000623685 672 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 AC012321.1-201ENST00000561622 1588 ntBASIC2.59□□□□□ -1.99
NPHP4O75161 RNU6-582P-201ENST00000362989 107 ntBASIC2.59□□□□□ -2
NPHP4O75161 Y_RNA.112-201ENST00000363250 102 ntBASIC2.59□□□□□ -2
NPHP4O75161 Y_RNA.327-201ENST00000365201 102 ntBASIC2.59□□□□□ -2
NPHP4O75161 SNORD82-201ENST00000365530 70 ntBASIC2.59□□□□□ -2
NPHP4O75161 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.59□□□□□ -2
NPHP4O75161 RNU6-712P-201ENST00000410558 100 ntBASIC2.59□□□□□ -2
NPHP4O75161 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -2
NPHP4O75161 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.59□□□□□ -2
NPHP4O75161 MTND4P15-201ENST00000437913 1033 ntBASIC2.59□□□□□ -2
NPHP4O75161 AC009238.1-201ENST00000442165 424 ntBASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms