Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-954P-201ENST00000411355 107 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 MCFD2P1-201ENST00000417812 300 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCD1O75127 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCD1O75127 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCD1O75127 ELOCP18-201ENST00000434209 337 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 TXNP1-201ENST00000441872 371 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 TDGF1P1-201ENST00000445734 527 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 RPL21P23-201ENST00000446654 460 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCD1O75127 RPL21P129-201ENST00000491732 478 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCD1O75127 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.72□□□□□ -1.49
PTCD1O75127 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.72□□□□□ -1.49
PTCD1O75127 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCD1O75127 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCD1O75127 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.72□□□□□ -1.49
PTCD1O75127 MIR4660-201ENST00000583549 74 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCD1O75127 AC009570.1-201ENST00000609599 745 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 AC007485.1-201ENST00000616755 206 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.72□□□□□ -1.49
PTCD1O75127 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCD1O75127 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCD1O75127 AC032011.1-201ENST00000611703 1549 ntBASIC5.72□□□□□ -1.49
PTCD1O75127 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTCD1O75127 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTCD1O75127 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
PTCD1O75127 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTCD1O75127 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PTCD1O75127 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCD1O75127 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCD1O75127 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTCD1O75127 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
PTCD1O75127 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCD1O75127 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCD1O75127 RNA5SP283-201ENST00000365604 119 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 RNU6-310P-201ENST00000384655 107 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 Y_RNA.574-201ENST00000384766 95 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AL360182.1-201ENST00000397433 468 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 NDUFS5P1-201ENST00000405668 289 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 SNORA11F-201ENST00000408237 128 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AL137014.1-201ENST00000420490 1226 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 PDSS1P1-201ENST00000422953 1114 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 SNAP23P1-201ENST00000433229 246 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCD1O75127 GAPDHP27-201ENST00000447427 1020 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC023424.1-201ENST00000496058 459 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCD1O75127 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCD1O75127 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCD1O75127 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCD1O75127 RN7SKP234-201ENST00000517173 224 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 TVP23BP1-201ENST00000557500 617 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC079587.1-201ENST00000603846 277 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC016727.2-201ENST00000603988 621 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 IGHV3-29-201ENST00000604817 344 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 MIR92B-201ENST00000607575 96 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC083806.3-201ENST00000614016 455 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AL138726.1-201ENST00000614873 333 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AC010378.1-201ENST00000619270 362 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 AL669831.3-213ENST00000636676 183 ntBASIC5.71□□□□□ -1.5
PTCD1O75127 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PTCD1O75127 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCD1O75127 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PTCD1O75127 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCD1O75127 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCD1O75127 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCD1O75127 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 Y_RNA.135-201ENST00000363439 95 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 RN7SKP224-201ENST00000364140 325 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 RNU6-1032P-201ENST00000384100 107 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 MIR3065-201ENST00000390137 79 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCD1O75127 RNU2-64P-201ENST00000411315 191 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 RPS23P10-201ENST00000416185 486 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 DPPA2P2-201ENST00000418220 897 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AC099677.1-201ENST00000420575 175 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCD1O75127 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCD1O75127 RPS20P1-201ENST00000434853 354 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 CYCSP43-201ENST00000438233 310 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 HMGB1P12-201ENST00000438594 598 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 HSFY6P-201ENST00000445573 403 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 RPL12P25-201ENST00000455592 494 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 RPL7P23-201ENST00000493874 747 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AP002812.1-201ENST00000495378 474 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AC008958.1-201ENST00000511047 682 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 Y_RNA.668-201ENST00000516233 93 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCD1O75127 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCD1O75127 AC015912.2-201ENST00000571053 181 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 MIR6128-201ENST00000615528 109 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AL162373.1-201ENST00000620433 407 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AP001005.3-201ENST00000622049 129 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AC138627.2-201ENST00000624202 601 ntBASIC5.7□□□□□ -1.5
PTCD1O75127 AC140479.6-201ENST00000633535 357 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms