Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 UBE2V2P2-201ENST00000587677 504 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC009159.1-201ENST00000618386 642 ntBASIC3.44□□□□□ -1.86
LDB3O75112 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC002550.2-201ENST00000621246 394 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC112200.1-201ENST00000625015 234 ntBASIC3.44□□□□□ -1.86
LDB3O75112 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 AC010149.2-201ENST00000637608 315 ntBASIC3.44□□□□□ -1.86
LDB3O75112 AC112487.2-201ENST00000637950 304 ntBASIC3.44□□□□□ -1.86
LDB3O75112 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LDB3O75112 AC011460.1-201ENST00000636268 1834 ntBASIC3.44□□□□□ -1.86
LDB3O75112 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB3O75112 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB3O75112 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB3O75112 AC007656.2-201ENST00000624902 4547 ntBASIC3.43□□□□□ -1.86
LDB3O75112 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB3O75112 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB3O75112 AC006026.1-201ENST00000444025 1803 ntBASIC3.43□□□□□ -1.86
LDB3O75112 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 Y_RNA.11-201ENST00000362375 109 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RNU5E-1-201ENST00000362477 120 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RNU4-1-201ENST00000363925 141 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LDB3O75112 RPL21P17-201ENST00000397467 475 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RNU6-908P-201ENST00000410160 94 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 RAB9AP3-201ENST00000412737 573 ntBASIC3.43□□□□□ -1.86
LDB3O75112 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 SDCBPP3-201ENST00000419629 891 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.43□□□□□ -1.86
LDB3O75112 AC012498.1-201ENST00000424037 437 ntBASIC3.43□□□□□ -1.86
LDB3O75112 TIMM9P3-201ENST00000428659 274 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 GTF2IP20-201ENST00000431663 360 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AC010655.1-201ENST00000449336 292 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RAB9AP1-201ENST00000449393 573 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RPS24P6-201ENST00000452670 400 ntBASIC3.43□□□□□ -1.86
LDB3O75112 MTND1P12-201ENST00000455231 147 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC007182.2-201ENST00000489251 402 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 TRMT10BP1-201ENST00000519377 943 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AC022616.6-201ENST00000520479 119 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.43□□□□□ -1.86
LDB3O75112 AL121603.1-201ENST00000553815 142 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 AL845331.3-202ENST00000562856 261 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.43□□□□□ -1.86
LDB3O75112 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 AC060771.1-201ENST00000582031 164 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AC025946.2-201ENST00000603398 234 ntBASIC3.43□□□□□ -1.86
LDB3O75112 RMST_3.1-201ENST00000611651 109 ntBASIC3.43□□□□□ -1.86
LDB3O75112 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB3O75112 CR392039.5-201ENST00000623201 510 ntBASIC3.43□□□□□ -1.86
LDB3O75112 AL365440.1-201ENST00000436135 2167 ntBASIC3.43□□□□□ -1.86
LDB3O75112 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 AP001350.1-201ENST00000601906 1524 ntBASIC3.43□□□□□ -1.86
LDB3O75112 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB3O75112 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB3O75112 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LDB3O75112 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.43□□□□□ -1.86
LDB3O75112 AC073073.2-201ENST00000609827 2578 ntBASIC3.43□□□□□ -1.86
LDB3O75112 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 RNU6-1085P-201ENST00000363576 107 ntBASIC3.42□□□□□ -1.86
LDB3O75112 SNORA51.2-201ENST00000364595 132 ntBASIC3.42□□□□□ -1.86
LDB3O75112 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 RNU6-1181P-201ENST00000384191 106 ntBASIC3.42□□□□□ -1.86
LDB3O75112 Y_RNA.535-201ENST00000384612 99 ntBASIC3.42□□□□□ -1.86
LDB3O75112 RNU6-1009P-201ENST00000390996 107 ntBASIC3.42□□□□□ -1.86
LDB3O75112 MRPL42P2-201ENST00000403169 426 ntBASIC3.42□□□□□ -1.86
LDB3O75112 RNU2-47P-201ENST00000410649 186 ntBASIC3.42□□□□□ -1.86
LDB3O75112 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 RPS7P15-201ENST00000415804 584 ntBASIC3.42□□□□□ -1.86
LDB3O75112 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 AC007283.2-201ENST00000424739 197 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC019097.1-201ENST00000424783 735 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 AC133104.1-201ENST00000429100 218 ntBASIC3.42□□□□□ -1.86
LDB3O75112 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms