Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC080188.3-201ENST00000624842 748 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.31□□□□□ -2.04
SHOX2O60902 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHOX2O60902 OR4G2P-202ENST00000641004 1759 ntBASIC2.31□□□□□ -2.04
SHOX2O60902 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHOX2O60902 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.3□□□□□ -2.04
SHOX2O60902 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 SET-203ENST00000372688 801 ntTSL 2 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL365496.1-201ENST00000426885 215 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 RAC1P8-201ENST00000427086 527 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AL356867.1-201ENST00000429623 299 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 GXYLT1P1-201ENST00000446657 490 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
SHOX2O60902 USP9YP34-201ENST00000453983 808 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AC008379.1-201ENST00000463655 464 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC113420.1-201ENST00000507903 571 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC022483.1-201ENST00000514020 567 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 RNU6-798P-201ENST00000516912 103 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 SNORA48.10-201ENST00000516965 160 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.3□□□□□ -2.04
SHOX2O60902 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC090502.2-201ENST00000549267 280 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 MIR4789-201ENST00000577469 82 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 OR4K7P-201ENST00000580232 945 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AC026790.2-201ENST00000606282 430 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AC020658.4-201ENST00000613987 684 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 MIR8084-201ENST00000614105 89 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 AL445493.3-201ENST00000619568 477 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
SHOX2O60902 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.3□□□□□ -2.04
SHOX2O60902 SDAD1P2-201ENST00000441308 2028 ntBASIC2.3□□□□□ -2.04
SHOX2O60902 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SHOX2O60902 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 U8.2-201ENST00000363156 134 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 MIR135A2-201ENST00000384854 100 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 AC107081.1-201ENST00000414975 361 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 DEFB130D-201ENST00000426866 237 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 ARL5AP4-201ENST00000430731 512 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.29□□□□□ -2.04
SHOX2O60902 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.29□□□□□ -2.04
SHOX2O60902 SUMO2P2-201ENST00000456482 255 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC087588.1-201ENST00000462203 316 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC126389.1-201ENST00000477436 290 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 RPS27P26-201ENST00000494583 239 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 XKRY-201ENST00000510392 1100 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.29□□□□□ -2.04
SHOX2O60902 IGKV3-31-201ENST00000523109 329 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
SHOX2O60902 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.29□□□□□ -2.04
SHOX2O60902 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 AC079148.1-201ENST00000565944 819 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.29□□□□□ -2.04
SHOX2O60902 AC092954.1-201ENST00000609121 445 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.29□□□□□ -2.04
SHOX2O60902 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
SHOX2O60902 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
SHOX2O60902 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHOX2O60902 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.29□□□□□ -2.04
SHOX2O60902 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SHOX2O60902 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
SHOX2O60902 HMGB1P5-201ENST00000255320 642 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 RNU6-492P-201ENST00000363035 104 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 RNU6-1066P-201ENST00000363573 105 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 MIR217-201ENST00000384817 110 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 MIR489-201ENST00000384923 84 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 RNU2-47P-201ENST00000410649 186 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 RNU6-575P-201ENST00000411326 105 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 BX664727.1-201ENST00000416024 466 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AL357078.2-201ENST00000416486 427 ntBASIC2.28□□□□□ -2.04
SHOX2O60902 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms