Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MIR1179-201ENST00000408703 91 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 RNU4-26P-201ENST00000410270 107 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 RPL21P24-201ENST00000413752 448 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.38□□□□□ -1.71
OPHN1O60890 AL162388.1-201ENST00000450912 352 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AC007547.1-201ENST00000462177 490 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.38□□□□□ -1.71
OPHN1O60890 RNU6-1092P-201ENST00000516955 87 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AC100870.1-201ENST00000522035 505 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
OPHN1O60890 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.38□□□□□ -1.71
OPHN1O60890 AL354984.3-201ENST00000604803 325 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 AC012443.1-201ENST00000605605 231 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 RNU6-89P-201ENST00000606519 100 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 RMST_7.1-201ENST00000621935 268 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
OPHN1O60890 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
OPHN1O60890 TAB3P1-202ENST00000452645 1634 ntBASIC4.38□□□□□ -1.71
OPHN1O60890 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
OPHN1O60890 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
OPHN1O60890 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
OPHN1O60890 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
OPHN1O60890 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.38□□□□□ -1.71
OPHN1O60890 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 EXOC5P1-201ENST00000510543 1969 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AL139276.1-201ENST00000311910 1001 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RNU6-1249P-201ENST00000363237 111 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
OPHN1O60890 RNU6-837P-201ENST00000391056 108 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 Y_RNA.615-201ENST00000410769 117 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RNU6-1148P-201ENST00000410992 104 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 MTND3P8-201ENST00000412909 339 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 OR6C66P-201ENST00000414917 930 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC018630.2-202ENST00000422992 927 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 IFNA20P-201ENST00000436840 528 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RPL23AP52-201ENST00000439311 478 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AL162389.1-201ENST00000449233 177 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC133473.1-201ENST00000455173 299 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RPL23AP81-201ENST00000455252 467 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RPL21P103-201ENST00000479921 488 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 RPL21P99-201ENST00000480369 423 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC091885.1-201ENST00000506658 268 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC103851.1-201ENST00000506833 274 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC112206.3-201ENST00000514578 389 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.37□□□□□ -1.71
OPHN1O60890 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.37□□□□□ -1.71
OPHN1O60890 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.37□□□□□ -1.71
OPHN1O60890 AC093027.1-201ENST00000546698 429 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
OPHN1O60890 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.37□□□□□ -1.71
OPHN1O60890 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.37□□□□□ -1.71
OPHN1O60890 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.37□□□□□ -1.71
OPHN1O60890 AC007687.1-201ENST00000602704 304 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC012669.1-201ENST00000603209 283 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 TUG1_2.1-201ENST00000614234 87 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 uc_338.11-201ENST00000619132 160 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 MIR6130-201ENST00000619419 109 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC103858.2-201ENST00000621471 543 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC090574.1-201ENST00000623186 233 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 AC025034.2-201ENST00000623264 286 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 TPTEP1-208ENST00000636884 213 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.37□□□□□ -1.71
OPHN1O60890 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.37□□□□□ -1.71
OPHN1O60890 GABPAP-201ENST00000419271 1356 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 LARP1BP1-201ENST00000506036 1359 ntBASIC4.37□□□□□ -1.71
OPHN1O60890 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
OPHN1O60890 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.37□□□□□ -1.71
OPHN1O60890 AL049555.1-201ENST00000562834 1933 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
OPHN1O60890 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.36□□□□□ -1.71
OPHN1O60890 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
OPHN1O60890 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
OPHN1O60890 AC116667.1-201ENST00000604855 2072 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
OPHN1O60890 MIR372-201ENST00000362225 67 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 RNU4-79P-201ENST00000362764 141 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 NCOR1P3-201ENST00000420479 303 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 AL645937.1-202ENST00000421799 937 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.36□□□□□ -1.71
OPHN1O60890 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.36□□□□□ -1.71
OPHN1O60890 AL117339.2-201ENST00000430475 180 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 AL358232.1-201ENST00000448030 501 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.36□□□□□ -1.71
OPHN1O60890 AL590639.1-201ENST00000456484 337 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 AL162395.1-201ENST00000457882 422 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 AC008481.1-201ENST00000463278 396 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 RPL23AP11-201ENST00000475260 469 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
OPHN1O60890 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.36□□□□□ -1.71
OPHN1O60890 RNU6-1095P-201ENST00000516148 108 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 RNA5SP143-201ENST00000516936 115 ntBASIC4.36□□□□□ -1.71
OPHN1O60890 NARSP2-201ENST00000518524 679 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms