Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC245054.1-201ENST00000420944 258 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.34□□□□□ -1.87
ZIC3O60481 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.34□□□□□ -1.87
ZIC3O60481 MRPS10P2-201ENST00000431226 381 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.34□□□□□ -1.87
ZIC3O60481 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.34□□□□□ -1.87
ZIC3O60481 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.34□□□□□ -1.87
ZIC3O60481 AC007537.2-201ENST00000472093 511 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC010631.1-201ENST00000474150 156 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 HMGN1P11-201ENST00000508668 303 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC105914.1-201ENST00000511798 226 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.34□□□□□ -1.87
ZIC3O60481 AC010342.1-201ENST00000514047 877 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.34□□□□□ -1.87
ZIC3O60481 RNU7-51P-201ENST00000516560 62 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 Y_RNA.693-201ENST00000516641 110 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 RNU6-410P-201ENST00000517006 107 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.34□□□□□ -1.87
ZIC3O60481 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.34□□□□□ -1.87
ZIC3O60481 AC008011.1-201ENST00000545989 227 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 RPL21P12-201ENST00000559810 515 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC007363.1-201ENST00000604736 620 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 Z84480.1-201ENST00000605131 311 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC007014.2-201ENST00000615581 479 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC244100.1-202ENST00000621554 382 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC005609.4-201ENST00000625071 447 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 MIR4275-201ENST00000636486 87 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 MIR3688-2-201ENST00000636963 87 ntBASIC3.34□□□□□ -1.87
ZIC3O60481 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.34□□□□□ -1.87
ZIC3O60481 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZIC3O60481 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.34□□□□□ -1.87
ZIC3O60481 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZIC3O60481 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ZIC3O60481 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
ZIC3O60481 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ZIC3O60481 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ZIC3O60481 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 Y_RNA.256-201ENST00000364594 104 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RNU6-1283P-201ENST00000365314 105 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RNU6-1181P-201ENST00000384191 106 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 MIR1-2-201ENST00000384961 85 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RAC1P3-201ENST00000416129 580 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.33□□□□□ -1.88
ZIC3O60481 MED13P1-201ENST00000428342 171 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RPS20P5-201ENST00000434808 360 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RBMX2P4-201ENST00000441256 376 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 MTATP6P30-201ENST00000443540 664 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 MTCO3P38-201ENST00000468910 766 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 RPS27AP1-201ENST00000475545 471 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 HSPD1P15-201ENST00000505573 1122 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 BTF3L4P4-201ENST00000506381 449 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 MLLT10P2-201ENST00000506434 249 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AC005921.1-201ENST00000510589 286 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 HMGB1P41-201ENST00000520234 440 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AC104383.1-201ENST00000530297 370 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.33□□□□□ -1.88
ZIC3O60481 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 AL512310.1-201ENST00000548639 172 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 OR4H12P-201ENST00000556269 907 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AC092325.1-201ENST00000566449 554 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AF038458.1-201ENST00000588406 262 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AP001596.2-201ENST00000608410 312 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 AL356321.1-201ENST00000621360 228 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 AC119674.1-207ENST00000641355 633 ntBASIC3.33□□□□□ -1.88
ZIC3O60481 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ZIC3O60481 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
ZIC3O60481 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.33□□□□□ -1.88
ZIC3O60481 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZIC3O60481 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
ZIC3O60481 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZIC3O60481 Y_RNA.367-201ENST00000365544 101 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 SNORA36C-201ENST00000384289 132 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 MIR200C-201ENST00000384980 68 ntBASIC3.32□□□□□ -1.88
ZIC3O60481 AC068050.1-201ENST00000394891 380 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms