Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC133104.1-201ENST00000429100 218 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC006946.1-201ENST00000429106 328 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC097713.2-201ENST00000430199 356 ntBASIC3.21□□□□□ -1.9
PRKNO60260 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.21□□□□□ -1.9
PRKNO60260 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.21□□□□□ -1.9
PRKNO60260 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.21□□□□□ -1.9
PRKNO60260 MTCO2P3-201ENST00000442543 421 ntBASIC3.21□□□□□ -1.9
PRKNO60260 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.21□□□□□ -1.9
PRKNO60260 MTND1P9-201ENST00000453775 944 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 AC004924.1-201ENST00000480160 781 ntBASIC3.21□□□□□ -1.9
PRKNO60260 RPS3AP14-201ENST00000483907 780 ntBASIC3.21□□□□□ -1.9
PRKNO60260 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 AC021146.1-201ENST00000511202 716 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC010493.1-201ENST00000513479 292 ntBASIC3.21□□□□□ -1.9
PRKNO60260 RNU6-1095P-201ENST00000516148 108 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 FAM92A1P1-201ENST00000528023 890 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.21□□□□□ -1.9
PRKNO60260 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.21□□□□□ -1.9
PRKNO60260 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
PRKNO60260 KC877982.1-201ENST00000602313 470 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AP001429.1-201ENST00000602568 530 ntBASIC3.21□□□□□ -1.9
PRKNO60260 XIAPP1-201ENST00000603162 600 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC012468.1-201ENST00000604888 430 ntBASIC3.21□□□□□ -1.9
PRKNO60260 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.21□□□□□ -1.9
PRKNO60260 AC004908.2-201ENST00000609090 574 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC006338.1-201ENST00000618453 749 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC073534.2-201ENST00000620377 381 ntBASIC3.21□□□□□ -1.9
PRKNO60260 USP8P1-201ENST00000494673 3183 ntBASIC3.21□□□□□ -1.9
PRKNO60260 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRKNO60260 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
PRKNO60260 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRKNO60260 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRKNO60260 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 RNU6-181P-201ENST00000363225 107 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNA5SP189-201ENST00000364920 115 ntBASIC3.2□□□□□ -1.9
PRKNO60260 SNORA70.4-201ENST00000365509 134 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNY3P13-201ENST00000365542 102 ntBASIC3.2□□□□□ -1.9
PRKNO60260 SNORA20.2-201ENST00000383922 131 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNVU1-14-201ENST00000384770 164 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AL136116.1-201ENST00000403591 381 ntBASIC3.2□□□□□ -1.9
PRKNO60260 HSPE1P26-201ENST00000405341 275 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.2□□□□□ -1.9
PRKNO60260 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 AC073464.1-201ENST00000429823 534 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.2□□□□□ -1.9
PRKNO60260 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 MTND3P21-201ENST00000433774 331 ntBASIC3.2□□□□□ -1.9
PRKNO60260 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 Z99127.3-201ENST00000448158 395 ntBASIC3.2□□□□□ -1.9
PRKNO60260 PSPHP1-201ENST00000450062 261 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
PRKNO60260 AC023598.1-201ENST00000472521 361 ntBASIC3.2□□□□□ -1.9
PRKNO60260 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
PRKNO60260 HMGB1P29-201ENST00000505659 499 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC011352.1-201ENST00000512300 793 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNU6-718P-201ENST00000516166 105 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNU6-445P-201ENST00000516949 107 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNA5SP337-201ENST00000517007 109 ntBASIC3.2□□□□□ -1.9
PRKNO60260 RNU6-1220P-201ENST00000517126 108 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.2□□□□□ -1.9
PRKNO60260 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.2□□□□□ -1.9
PRKNO60260 AP000857.1-201ENST00000532151 543 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 ZNF519P2-201ENST00000557032 169 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 MIR3167-201ENST00000579623 85 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.2□□□□□ -1.9
PRKNO60260 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.2□□□□□ -1.9
PRKNO60260 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AL162713.1-201ENST00000604480 262 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 AC245517.5-201ENST00000611529 162 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AC084757.4-201ENST00000616350 526 ntBASIC3.2□□□□□ -1.9
PRKNO60260 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
PRKNO60260 U4.5-201ENST00000617137 123 ntBASIC3.2□□□□□ -1.9
PRKNO60260 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
PRKNO60260 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
PRKNO60260 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRKNO60260 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.2□□□□□ -1.9
PRKNO60260 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms