Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RPAP2P1-201ENST00000603626 1168 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 MTND4P23-201ENST00000447723 1363 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 TPTE2P4-201ENST00000258589 1605 ntBASIC1.28□□□□□ -2.2
SSSCA1O60232 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.28□□□□□ -2.2
SSSCA1O60232 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SSSCA1O60232 ZNF702P-202ENST00000434269 1966 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 ELF2P3-201ENST00000445099 1506 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 UBE2L2-201ENST00000254302 429 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU4-82P-201ENST00000362443 140 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 Z98749.2-208ENST00000381646 500 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU6-1226P-201ENST00000384317 107 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU6-821P-201ENST00000390995 107 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU6-1197P-201ENST00000391183 107 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL356432.1-201ENST00000405809 419 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 PTGES3P2-201ENST00000407942 482 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 SNORA3.2-201ENST00000408221 125 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU6-233P-201ENST00000410845 141 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC124916.1-201ENST00000444020 547 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL500527.1-201ENST00000448532 255 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.27□□□□□ -2.21
SSSCA1O60232 USP9YP10-201ENST00000454868 628 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU7-23P-201ENST00000459465 62 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 KATNBL1P4-201ENST00000503545 918 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 PCNAP1-201ENST00000505363 709 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC112518.2-201ENST00000508565 425 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC008885.2-201ENST00000509506 930 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.27□□□□□ -2.21
SSSCA1O60232 SCARNA17.1-201ENST00000516211 143 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 SCARNA17.2-201ENST00000516334 143 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 Y_RNA.675-201ENST00000516389 149 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC008676.3-201ENST00000521237 435 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AP005639.2-201ENST00000527592 928 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.27□□□□□ -2.21
SSSCA1O60232 HSBP1P1-201ENST00000555205 166 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 HMGB1P14-201ENST00000557424 591 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC090312.2-201ENST00000582687 378 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC005034.5-201ENST00000604219 466 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC021749.1-201ENST00000604322 607 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.27□□□□□ -2.21
SSSCA1O60232 AC106052.1-201ENST00000608029 497 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC093673.2-201ENST00000609674 331 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC016252.1-201ENST00000609721 474 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 SCARNA17.4-201ENST00000614296 143 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC090116.1-201ENST00000615679 446 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AL353748.2-201ENST00000622148 471 ntBASIC1.27□□□□□ -2.21
SSSCA1O60232 AC092881.1-201ENST00000638218 2733 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 U8.3-201ENST00000363321 132 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SSSCA1O60232 RNU6-1328P-201ENST00000410938 106 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AL445183.3-201ENST00000414168 502 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AIMP1P2-201ENST00000425294 312 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.26□□□□□ -2.21
SSSCA1O60232 RPL23AP3-201ENST00000453844 468 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 FO393415.2-201ENST00000480085 343 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AC107398.1-201ENST00000486904 505 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.26□□□□□ -2.21
SSSCA1O60232 RPL23AP63-201ENST00000498752 471 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.26□□□□□ -2.21
SSSCA1O60232 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.26□□□□□ -2.21
SSSCA1O60232 AC021087.2-201ENST00000504656 1203 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.26□□□□□ -2.21
SSSCA1O60232 AC022880.1-201ENST00000534017 973 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 CBX3P4-201ENST00000538909 354 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.26□□□□□ -2.21
SSSCA1O60232 MIR5571-201ENST00000577998 113 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.26□□□□□ -2.21
SSSCA1O60232 AC103710.2-201ENST00000609912 942 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AC098679.5-201ENST00000624394 571 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 AC064859.1-201ENST00000624741 174 ntBASIC1.26□□□□□ -2.21
SSSCA1O60232 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SSSCA1O60232 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSSCA1O60232 MIR583-201ENST00000384846 75 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 SNORA40.18-201ENST00000391200 128 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 SNRPEP2-201ENST00000397592 279 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 SNORA11.1-201ENST00000408133 129 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 OR9R1P-201ENST00000412200 877 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AL109913.1-201ENST00000421173 514 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AC003685.2-201ENST00000422795 395 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AC090774.1-201ENST00000435925 246 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 RPL7P54-201ENST00000438336 674 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.25□□□□□ -2.21
SSSCA1O60232 AC097499.1-201ENST00000444277 208 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AL627224.1-201ENST00000448334 444 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AP001486.1-201ENST00000463339 476 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AL121769.1-201ENST00000469473 401 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SSSCA1O60232 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.25□□□□□ -2.21
SSSCA1O60232 AC008549.1-201ENST00000512900 643 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.25□□□□□ -2.21
SSSCA1O60232 RNA5SP182-201ENST00000516064 82 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
SSSCA1O60232 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms