Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.87□□□□□ -2.11
SSNA1O43805 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.87□□□□□ -2.11
SSNA1O43805 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.87□□□□□ -2.11
SSNA1O43805 RPS15AP17-201ENST00000470598 390 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 RN7SL807P-201ENST00000470923 297 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SSNA1O43805 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 RNU6-528P-201ENST00000516926 100 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SSNA1O43805 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.87□□□□□ -2.11
SSNA1O43805 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 AL138976.2-201ENST00000563989 694 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.87□□□□□ -2.11
SSNA1O43805 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.87□□□□□ -2.11
SSNA1O43805 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.87□□□□□ -2.11
SSNA1O43805 AP000403.1-201ENST00000603349 851 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AP000238.1-201ENST00000608759 426 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AC107294.1-201ENST00000609524 467 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 MIR7975-201ENST00000619350 68 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AC084824.4-201ENST00000620106 731 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SSNA1O43805 RNA5SP374-201ENST00000362939 125 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 RNU5E-8P-201ENST00000363502 116 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 RNU6-525P-201ENST00000363685 104 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 RNA5SP267-201ENST00000364893 126 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 Y_RNA.548-201ENST00000384656 105 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 MIR183-201ENST00000384958 110 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 SNRPEP2-201ENST00000397592 279 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AL445529.1-201ENST00000398713 389 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AL359511.1-201ENST00000402970 211 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 MTATP6P27-201ENST00000416987 621 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.86□□□□□ -2.11
SSNA1O43805 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.86□□□□□ -2.11
SSNA1O43805 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.86□□□□□ -2.11
SSNA1O43805 RN7SKP157-201ENST00000516174 282 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSNA1O43805 AC006518.2-201ENST00000542513 940 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 OR11H5P-201ENST00000554039 926 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 RPAP2P1-201ENST00000603626 1168 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AC009314.1-201ENST00000603871 304 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AL162373.1-201ENST00000620433 407 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.86□□□□□ -2.11
SSNA1O43805 AC025048.6-202ENST00000627667 438 ntBASIC1.86□□□□□ -2.11
SSNA1O43805 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.86□□□□□ -2.11
SSNA1O43805 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SSNA1O43805 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
SSNA1O43805 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SSNA1O43805 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SSNA1O43805 RNU6-859P-201ENST00000362728 107 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RNA5SP515-201ENST00000364570 118 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 SNORA56-201ENST00000383966 129 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RNU1-148P-201ENST00000384472 162 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 MIR888-201ENST00000401186 77 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RNU2-33P-201ENST00000410344 192 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 LUZP4P1-201ENST00000415420 344 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.85□□□□□ -2.11
SSNA1O43805 AL158156.1-201ENST00000422509 473 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 MED14P1-201ENST00000430517 648 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 SDR42E1P3-201ENST00000438345 502 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.85□□□□□ -2.11
SSNA1O43805 PSPHP1-201ENST00000450062 261 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 OFD1P3Y-201ENST00000453312 783 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.85□□□□□ -2.11
SSNA1O43805 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 AC093677.1-201ENST00000514414 678 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 RNA5SP320-201ENST00000516263 124 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 SCARNA3-201ENST00000517097 143 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 HSPA8P13-201ENST00000523715 472 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AC021269.2-201ENST00000532318 330 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.85□□□□□ -2.11
SSNA1O43805 AP001542.1-201ENST00000591314 200 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.85□□□□□ -2.11
SSNA1O43805 AC136601.2-201ENST00000604356 474 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 MIR378J-201ENST00000611988 109 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AL590099.1-201ENST00000615276 138 ntBASIC1.85□□□□□ -2.11
SSNA1O43805 AP001486.3-201ENST00000615334 372 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms