Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP1O15259 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NPHP1O15259 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP1O15259 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP1O15259 PWAR6-201ENST00000552334 4618 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 SKINT1L-201ENST00000401057 817 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AL590383.1-201ENST00000428602 75 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 UBE2D3P1-201ENST00000436669 444 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.01□□□□□ -1.77
NPHP1O15259 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP1O15259 AL139824.2-201ENST00000458731 1095 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 RPS15AP36-201ENST00000492022 382 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 FCF1P3-201ENST00000496394 590 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 OR5G4P-201ENST00000525251 760 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AP000857.1-201ENST00000532151 543 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AC008015.1-201ENST00000555505 465 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AL158211.1-201ENST00000566763 763 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 RPL23AP84-201ENST00000571193 464 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 TPMTP1-201ENST00000592307 737 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AC004908.2-201ENST00000609090 574 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.01□□□□□ -1.77
NPHP1O15259 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP1O15259 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP1O15259 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP1O15259 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.01□□□□□ -1.77
NPHP1O15259 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP1O15259 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPHP1O15259 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NPHP1O15259 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPHP1O15259 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPHP1O15259 AC110754.1-201ENST00000399740 601 ntBASIC4□□□□□ -1.77
NPHP1O15259 CCNG1P1-201ENST00000406783 885 ntBASIC4□□□□□ -1.77
NPHP1O15259 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4□□□□□ -1.77
NPHP1O15259 RPS27AP14-201ENST00000422868 454 ntBASIC4□□□□□ -1.77
NPHP1O15259 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 MTND5P25-201ENST00000430499 799 ntBASIC4□□□□□ -1.77
NPHP1O15259 AC109583.1-201ENST00000432156 268 ntBASIC4□□□□□ -1.77
NPHP1O15259 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4□□□□□ -1.77
NPHP1O15259 RPS4XP22-201ENST00000480755 780 ntBASIC4□□□□□ -1.77
NPHP1O15259 AC093331.1-201ENST00000521474 169 ntBASIC4□□□□□ -1.77
NPHP1O15259 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4□□□□□ -1.77
NPHP1O15259 MIR3124-201ENST00000582636 67 ntBASIC4□□□□□ -1.77
NPHP1O15259 AC090616.2-202ENST00000584248 222 ntBASIC4□□□□□ -1.77
NPHP1O15259 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 PRELID3BP8-201ENST00000604148 295 ntBASIC4□□□□□ -1.77
NPHP1O15259 AC007038.2-201ENST00000608095 740 ntBASIC4□□□□□ -1.77
NPHP1O15259 AL355472.4-201ENST00000610233 626 ntBASIC4□□□□□ -1.77
NPHP1O15259 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4□□□□□ -1.77
NPHP1O15259 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4□□□□□ -1.77
NPHP1O15259 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4□□□□□ -1.77
NPHP1O15259 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4□□□□□ -1.77
NPHP1O15259 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4□□□□□ -1.77
NPHP1O15259 TPTE2P4-201ENST00000258589 1605 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPHP1O15259 RNY4P24-201ENST00000362735 96 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPHP1O15259 SNORA48.8-201ENST00000391324 134 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 TXNP7-201ENST00000406296 293 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC078974.1-201ENST00000411597 223 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.99□□□□□ -1.77
NPHP1O15259 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP1O15259 AL353705.1-201ENST00000433468 480 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 MTCO3P45-201ENST00000443036 613 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP1O15259 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP1O15259 RPS20P20-201ENST00000460498 340 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 KC877373.1-201ENST00000479066 408 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 RPS3AP22-201ENST00000488297 769 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHP1O15259 MRPS33P3-201ENST00000513456 322 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 NRON-201ENST00000517270 370 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.99□□□□□ -1.77
NPHP1O15259 AC011602.1-201ENST00000546484 331 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.99□□□□□ -1.77
NPHP1O15259 AC034105.3-201ENST00000565294 442 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 MIR3186-201ENST00000577404 85 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 RPL12P50-201ENST00000603116 116 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHP1O15259 AC010133.1-201ENST00000615809 842 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AL356266.1-201ENST00000623311 483 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC006927.3-201ENST00000638789 384 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 AC005183.1-201ENST00000603687 1979 ntBASIC3.99□□□□□ -1.77
NPHP1O15259 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NPHP1O15259 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPHP1O15259 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPHP1O15259 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP1O15259 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP1O15259 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP1O15259 MIR30E-201ENST00000362104 92 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms