Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU5D-1-201ENST00000363299 116 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
UBFD1O14562 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 SNORD51-201ENST00000384320 80 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 MIR524-201ENST00000385242 87 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 AL356320.2-201ENST00000417263 507 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 SRIP2-201ENST00000428470 166 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 RAC1P7-201ENST00000445367 377 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 AC104058.1-201ENST00000448028 297 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AL500527.1-201ENST00000448532 255 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 COX6CP18-201ENST00000448769 222 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.97□□□□□ -2.09
UBFD1O14562 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.97□□□□□ -2.09
UBFD1O14562 AC118282.2-201ENST00000508739 374 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 RNA5SP135-201ENST00000517019 125 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.97□□□□□ -2.09
UBFD1O14562 MTCO1P47-201ENST00000523889 1271 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UBFD1O14562 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.97□□□□□ -2.09
UBFD1O14562 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.97□□□□□ -2.09
UBFD1O14562 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 NRBF2P1-201ENST00000587407 859 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.97□□□□□ -2.09
UBFD1O14562 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.97□□□□□ -2.09
UBFD1O14562 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC079791.1-201ENST00000605356 973 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC012443.1-201ENST00000605605 231 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UBFD1O14562 AC110079.1-202ENST00000635213 138 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 ZNF663P-202ENST00000641770 1131 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 AC002543.1-201ENST00000299783 1954 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 ZNF849P-201ENST00000594711 1566 ntBASIC1.97□□□□□ -2.09
UBFD1O14562 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
UBFD1O14562 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UBFD1O14562 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
UBFD1O14562 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
UBFD1O14562 RNU6-1155P-201ENST00000363554 107 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.96□□□□□ -2.1
UBFD1O14562 SNORA6-201ENST00000384033 151 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 NPM1P10-201ENST00000398310 865 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RNU2-15P-201ENST00000410692 191 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC092573.2-201ENST00000434546 243 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC004866.2-201ENST00000438285 481 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.96□□□□□ -2.1
UBFD1O14562 SETP11-201ENST00000473027 690 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RPL31P60-201ENST00000478450 367 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 OR52A4P-202ENST00000481634 799 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RPL23AP70-201ENST00000483361 460 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC025768.1-201ENST00000510057 267 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RNU6-362P-201ENST00000516736 90 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RNA5SP471-201ENST00000516971 106 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 RNU6-548P-201ENST00000517083 115 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC090502.2-201ENST00000549267 280 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 SULT1C2P1-202ENST00000562418 459 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 MIR4789-201ENST00000577469 82 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC010738.1-201ENST00000604970 987 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC120053.1-201ENST00000607706 736 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 Y_RNA.783-201ENST00000613546 102 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AL136981.2-201ENST00000617319 734 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AL445493.3-201ENST00000619568 477 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 AC097460.3-201ENST00000623099 442 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 PISRT1-201ENST00000626175 531 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 MTCO1P23-201ENST00000415223 1526 ntBASIC1.96□□□□□ -2.1
UBFD1O14562 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
UBFD1O14562 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 SNORD114-1-201ENST00000362705 72 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 MIR135A2-201ENST00000384854 100 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 MTCO2P31-201ENST00000402702 684 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AL133264.1-201ENST00000407157 562 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.95□□□□□ -2.1
UBFD1O14562 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.95□□□□□ -2.1
UBFD1O14562 PSMA6P3-201ENST00000428242 164 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.95□□□□□ -2.1
UBFD1O14562 NDUFB4P6-201ENST00000436819 366 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AC002542.1-201ENST00000440683 193 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 Z82190.1-201ENST00000454534 490 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 PNPLA4P1-201ENST00000458328 305 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AC108734.3-201ENST00000481241 1165 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
UBFD1O14562 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBFD1O14562 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBFD1O14562 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.95□□□□□ -2.1
UBFD1O14562 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBFD1O14562 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.95□□□□□ -2.1
UBFD1O14562 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBFD1O14562 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.95□□□□□ -2.1
UBFD1O14562 AC025755.1-201ENST00000521306 278 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 ARL2BPP5-201ENST00000523141 481 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 343.2 ms