Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.52□□□□□ -1.85
CUX2O14529 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
CUX2O14529 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.52□□□□□ -1.85
CUX2O14529 AC015908.1-201ENST00000478739 476 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC092451.1-201ENST00000480211 153 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC008427.1-201ENST00000503102 655 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.52□□□□□ -1.85
CUX2O14529 AC090079.2-201ENST00000575289 768 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC090666.1-201ENST00000578241 445 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AL078603.1-201ENST00000603824 313 ntBASIC3.52□□□□□ -1.85
CUX2O14529 AC092574.1-201ENST00000609771 420 ntBASIC3.52□□□□□ -1.85
CUX2O14529 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.51□□□□□ -1.85
CUX2O14529 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.51□□□□□ -1.85
CUX2O14529 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CUX2O14529 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.51□□□□□ -1.85
CUX2O14529 AC111188.2-201ENST00000529697 1387 ntBASIC3.51□□□□□ -1.85
CUX2O14529 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.51□□□□□ -1.85
CUX2O14529 RNU6-374P-201ENST00000364146 108 ntBASIC3.51□□□□□ -1.85
CUX2O14529 Y_RNA.327-201ENST00000365201 102 ntBASIC3.51□□□□□ -1.85
CUX2O14529 SAR1AP2-201ENST00000392696 594 ntBASIC3.51□□□□□ -1.85
CUX2O14529 MCTS2P-201ENST00000394552 546 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AL603865.2-201ENST00000401679 213 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AL133264.1-201ENST00000407157 562 ntBASIC3.51□□□□□ -1.85
CUX2O14529 RNU6-575P-201ENST00000411326 105 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AL133384.1-201ENST00000412744 351 ntBASIC3.51□□□□□ -1.85
CUX2O14529 RPS7P9-201ENST00000414704 586 ntBASIC3.51□□□□□ -1.85
CUX2O14529 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AL358453.1-201ENST00000422522 250 ntBASIC3.51□□□□□ -1.85
CUX2O14529 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.51□□□□□ -1.85
CUX2O14529 AC005345.1-201ENST00000431868 217 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.51□□□□□ -1.85
CUX2O14529 AC093801.2-201ENST00000503966 1050 ntBASIC3.51□□□□□ -1.85
CUX2O14529 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.51□□□□□ -1.85
CUX2O14529 RNA5SP135-201ENST00000517019 125 ntBASIC3.51□□□□□ -1.85
CUX2O14529 MTND5P21-201ENST00000531961 522 ntBASIC3.51□□□□□ -1.85
CUX2O14529 VN1R87P-201ENST00000596706 487 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AC025588.3-201ENST00000604182 274 ntBASIC3.51□□□□□ -1.85
CUX2O14529 AP002802.2-201ENST00000605877 235 ntBASIC3.51□□□□□ -1.85
CUX2O14529 MIR6734-201ENST00000621166 68 ntBASIC3.51□□□□□ -1.85
CUX2O14529 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.51□□□□□ -1.85
CUX2O14529 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.51□□□□□ -1.85
CUX2O14529 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CUX2O14529 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CUX2O14529 MTND4P35-201ENST00000604257 1375 ntBASIC3.5□□□□□ -1.85
CUX2O14529 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CUX2O14529 RNU6-251P-201ENST00000363235 104 ntBASIC3.5□□□□□ -1.85
CUX2O14529 RNU6-236P-201ENST00000363886 106 ntBASIC3.5□□□□□ -1.85
CUX2O14529 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.5□□□□□ -1.85
CUX2O14529 SNORD116-23-201ENST00000384645 92 ntBASIC3.5□□□□□ -1.85
CUX2O14529 RNU6-837P-201ENST00000391056 108 ntBASIC3.5□□□□□ -1.85
CUX2O14529 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.5□□□□□ -1.85
CUX2O14529 AL035405.1-201ENST00000400795 710 ntBASIC3.5□□□□□ -1.85
CUX2O14529 U3.37-201ENST00000408528 213 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
CUX2O14529 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.5□□□□□ -1.85
CUX2O14529 RPS7P2-201ENST00000435134 607 ntBASIC3.5□□□□□ -1.85
CUX2O14529 HMGB1P31-201ENST00000437242 427 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AC241584.1-201ENST00000438469 1241 ntBASIC3.5□□□□□ -1.85
CUX2O14529 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CUX2O14529 SNRPFP4-201ENST00000456366 242 ntBASIC3.5□□□□□ -1.85
CUX2O14529 MTCO3P2-201ENST00000457365 171 ntBASIC3.5□□□□□ -1.85
CUX2O14529 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.5□□□□□ -1.85
CUX2O14529 ARL2BPP5-201ENST00000523141 481 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.5□□□□□ -1.85
CUX2O14529 ZNF971P-201ENST00000562068 1249 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AL583856.2-201ENST00000606298 543 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AP000238.1-201ENST00000608759 426 ntBASIC3.5□□□□□ -1.85
CUX2O14529 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CUX2O14529 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CUX2O14529 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CUX2O14529 AP000720.1-201ENST00000625091 483 ntBASIC3.5□□□□□ -1.85
CUX2O14529 AC126544.2-201ENST00000625174 749 ntBASIC3.5□□□□□ -1.85
CUX2O14529 U6.98-201ENST00000637157 84 ntBASIC3.5□□□□□ -1.85
CUX2O14529 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.5□□□□□ -1.85
CUX2O14529 DBF4P1-201ENST00000412976 1892 ntBASIC3.5□□□□□ -1.85
CUX2O14529 ZNF37BP-203ENST00000452306 1352 ntBASIC3.49□□□□□ -1.85
CUX2O14529 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.49□□□□□ -1.85
CUX2O14529 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CUX2O14529 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CUX2O14529 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CUX2O14529 RNU1-138P-201ENST00000384093 164 ntBASIC3.49□□□□□ -1.85
CUX2O14529 HSPE1P26-201ENST00000405341 275 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AL023807.1-201ENST00000407932 359 ntBASIC3.49□□□□□ -1.85
CUX2O14529 BTF3P8-201ENST00000414577 526 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.49□□□□□ -1.85
CUX2O14529 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.49□□□□□ -1.85
CUX2O14529 MRPL42P4-201ENST00000453267 443 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AC004263.1-201ENST00000479327 332 ntBASIC3.49□□□□□ -1.85
CUX2O14529 SNORA25.15-201ENST00000516487 89 ntBASIC3.49□□□□□ -1.85
CUX2O14529 ZNF705CP-201ENST00000530515 889 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.49□□□□□ -1.85
CUX2O14529 AL445435.1-201ENST00000604232 665 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AL512427.1-201ENST00000618593 349 ntBASIC3.49□□□□□ -1.85
CUX2O14529 MIR4278-201ENST00000636094 69 ntBASIC3.49□□□□□ -1.85
CUX2O14529 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.49□□□□□ -1.85
CUX2O14529 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.49□□□□□ -1.85
CUX2O14529 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms