Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 ARL2BPP3-201ENST00000421226 480 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RPP40P1-201ENST00000426762 456 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC092170.1-201ENST00000440211 356 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC078857.1-201ENST00000469870 667 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC107954.1-201ENST00000565906 727 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RPL23AP78-201ENST00000599928 470 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 SEPT7P9-203ENST00000604116 343 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 HSPE1P14-201ENST00000605812 302 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AL445493.3-201ENST00000619568 477 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 RNU6-156P-201ENST00000621869 107 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC025048.6-202ENST00000627667 438 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 DBF4P1-201ENST00000412976 1892 ntBASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COL6A6A6NMZ7 AC073055.1-201ENST00000456901 1621 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 SNORD115-48-201ENST00000364764 76 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RNU6-1005P-201ENST00000384519 107 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AL023807.1-201ENST00000407932 359 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RPL30P3-201ENST00000424262 333 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 VN1R42P-201ENST00000424651 344 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC023347.2-201ENST00000433994 462 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC027673.1-201ENST00000456245 405 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC090515.1-201ENST00000465295 476 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC069528.1-202ENST00000482888 637 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC034222.1-201ENST00000494052 532 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC005912.1-201ENST00000495392 255 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC121161.1-201ENST00000510606 652 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MTND2P31-201ENST00000512602 616 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MIR3618-201ENST00000580330 88 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC002487.1-201ENST00000604565 994 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC024560.3-201ENST00000608482 349 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RMST_10.1-201ENST00000616309 154 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AL356118.1-201ENST00000635272 1078 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MKKS-204ENST00000639674 192 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MTND4P34-201ENST00000572715 1371 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MTCO1P18-201ENST00000455518 1419 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RNU6-481P-201ENST00000384194 107 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MTND4P13-201ENST00000402078 1023 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC010385.1-201ENST00000412374 256 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC019070.1-201ENST00000415008 1024 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 DPPA2P1-201ENST00000428060 556 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 YWHAZP8-201ENST00000436935 731 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 HMGN2P20-201ENST00000437531 273 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MTND4P15-201ENST00000437913 1033 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC097499.1-201ENST00000444277 208 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 RFC5P1-201ENST00000454419 874 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AL049829.1-201ENST00000465411 156 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC098799.2-201ENST00000509466 868 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 C1DP5-201ENST00000525775 383 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC023825.1-201ENST00000566704 1030 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MIR4419B-201ENST00000577260 68 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MIR4789-201ENST00000577469 82 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC034102.8-201ENST00000615146 484 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 AC097460.3-201ENST00000623099 442 ntBASIC1.46□□□□□ -2.18
COL6A6A6NMZ7 MIR16-2-201ENST00000362117 81 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 RNA5SP338-201ENST00000410495 85 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC006548.1-201ENST00000427470 102 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 ELOCP6-201ENST00000429066 328 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 UBE2V1P6-201ENST00000430840 422 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 MTCYBP15-201ENST00000433123 1127 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 CKS1BP5-201ENST00000434172 273 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL512661.1-201ENST00000434586 1253 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL031663.1-201ENST00000437445 219 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 ELOCP12-201ENST00000458706 328 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms