Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORD53B-201ENST00000577887 78 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC004908.2-201ENST00000609090 574 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC091834.1-201ENST00000614543 472 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AP001486.3-201ENST00000615334 372 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AL590410.1-201ENST00000617925 333 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC027309.3-201ENST00000623419 351 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 WWP1P1-201ENST00000466609 2769 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 ZNF90P1-201ENST00000480493 1951 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR449A-201ENST00000362113 91 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA67.6-201ENST00000391093 99 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 DSTNP4-201ENST00000399472 474 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 RSL24D1P4-201ENST00000400938 484 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC007560.1-201ENST00000426912 237 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 NDUFB4P6-201ENST00000436819 366 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AL714022.1-201ENST00000439897 151 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 BX248409.1-201ENST00000455497 255 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 UBL5P3-201ENST00000475112 231 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC116337.2-201ENST00000477662 156 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC107398.1-201ENST00000486904 505 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MTCYBP17-201ENST00000503579 789 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MLLT10P2-201ENST00000506434 249 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORD116-30-201ENST00000516468 85 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 YWHAZP1-201ENST00000556286 722 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 FAM60BP-201ENST00000578364 658 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR3616-201ENST00000584070 92 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC012254.4-201ENST00000588843 273 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 DPRXP5-201ENST00000604662 539 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 HMGB1P51-201ENST00000605166 638 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC107214.2-201ENST00000608204 634 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AL627230.6-201ENST00000611129 280 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC025594.3-201ENST00000613068 790 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR6845-201ENST00000613182 61 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 AC131280.1-202ENST00000624067 4211 ntBASIC1.19□□□□□ -2.22
TRAV1-2A0A0B4J238 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL022578.1-201ENST00000439330 1433 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-1074P-201ENST00000383995 104 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC016769.3-201ENST00000396562 315 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RPS3AP24-201ENST00000407896 734 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-712P-201ENST00000410558 100 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-920P-201ENST00000410926 92 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC099677.1-201ENST00000420575 175 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL358075.3-201ENST00000426289 226 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC234781.2-201ENST00000426370 994 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL392003.1-201ENST00000434394 243 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 ARF4P4-201ENST00000439608 520 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 MTCYBP3-201ENST00000445588 1137 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 MTND4P2-201ENST00000507767 1203 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-970P-201ENST00000516312 107 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA70.16-201ENST00000516390 95 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU7-193P-201ENST00000516723 65 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA31.18-201ENST00000517043 134 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC022634.1-201ENST00000520765 532 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL160236.1-201ENST00000556317 195 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 ATP5F1P7-201ENST00000567330 760 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL022099.1-201ENST00000604551 712 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC103710.4-201ENST00000609301 899 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC003001.2-201ENST00000616294 831 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC091304.6-201ENST00000619761 202 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AL353748.2-201ENST00000622148 471 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 AC010872.1-201ENST00000624225 675 ntBASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV1-2A0A0B4J238 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 U8.2-201ENST00000363156 134 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU1-105P-201ENST00000363470 161 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU4-13P-201ENST00000364019 141 ntBASIC1.17□□□□□ -2.22
TRAV1-2A0A0B4J238 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms