Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
DDX41Q9UJV9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.09□□□□□ -1.6
DDX41Q9UJV9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
DDX41Q9UJV9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RNU5A-1-201ENST00000362698 116 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RNU6-82P-201ENST00000363970 107 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RN7SKP227-201ENST00000364445 330 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 SNORA51.2-201ENST00000364595 132 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RNU6-116P-201ENST00000384042 109 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AL451054.2-201ENST00000420896 202 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RPL21P112-201ENST00000434403 463 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 PPP1R2P5-201ENST00000457256 603 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC116533.1-201ENST00000459748 321 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC010285.1-201ENST00000470580 392 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC106872.2-201ENST00000494303 480 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 FAM206BP-201ENST00000510179 541 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 RNU6-123P-201ENST00000516163 102 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AL355836.1-201ENST00000555951 870 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AC092807.2-201ENST00000609367 243 ntBASIC5.08□□□□□ -1.6
DDX41Q9UJV9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DDX41Q9UJV9 AP001350.1-201ENST00000601906 1524 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 RNU6-629P-201ENST00000384061 103 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 NDUFB4P5-201ENST00000415445 361 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 EI24P1-201ENST00000416584 867 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 HSPE1P1-201ENST00000421494 318 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 RPL26P6-201ENST00000440913 438 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 RNU6-1208P-201ENST00000459588 107 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC108022.1-201ENST00000493466 478 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 TTC39CP1-201ENST00000512513 755 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC112206.3-201ENST00000514578 389 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC090151.1-201ENST00000520784 730 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AL121576.1-201ENST00000556055 276 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC015912.2-201ENST00000571053 181 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC104237.2-201ENST00000612456 443 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AL445567.2-201ENST00000618935 498 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC068724.3-201ENST00000625906 87 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 PRO1804-201ENST00000623780 2050 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 SDAD1P2-201ENST00000441308 2028 ntBASIC5.07□□□□□ -1.6
DDX41Q9UJV9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.07□□□□□ -1.6
DDX41Q9UJV9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms