Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 YPEL5P3-201ENST00000547227 352 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC012507.3-201ENST00000603556 477 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC012443.1-201ENST00000605605 231 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC009994.1-201ENST00000606889 253 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC048347.1-201ENST00000624621 427 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.43□□□□□ -1.7
USP25Q9UHP3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP25Q9UHP3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP25Q9UHP3 AC024560.2-201ENST00000507981 1497 ntBASIC4.43□□□□□ -1.7
USP25Q9UHP3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP25Q9UHP3 RNU4-1-201ENST00000363925 141 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 RN7SKP227-201ENST00000364445 330 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 RNU6-877P-201ENST00000383868 107 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL136372.1-201ENST00000403060 228 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 HMGN1P24-201ENST00000412282 298 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC017083.1-201ENST00000428093 483 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 RPL35AP22-201ENST00000436855 335 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 CALM1P1-201ENST00000442082 433 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL354685.2-201ENST00000448218 1447 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 ELOCP23-201ENST00000452014 332 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 RPL7P15-201ENST00000461190 712 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 RNU6-507P-201ENST00000516045 100 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 SNORA31.8-201ENST00000516327 108 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 RNU6-798P-201ENST00000516912 103 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC087369.1-201ENST00000520775 996 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AP003072.2-201ENST00000527756 676 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AP000907.2-201ENST00000530827 353 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC068790.3-201ENST00000602988 553 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 C8orf59P2-201ENST00000603441 271 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AP001330.4-201ENST00000604350 154 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 MIR98-201ENST00000606724 119 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL161734.1-201ENST00000609720 557 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AL450472.3-201ENST00000615578 367 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC139792.3-201ENST00000623525 224 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.42□□□□□ -1.7
USP25Q9UHP3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.42□□□□□ -1.7
USP25Q9UHP3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 MTND4P12-201ENST00000498999 1377 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC010733.2-201ENST00000589496 5702 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP25Q9UHP3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 OR5J1P-201ENST00000313544 939 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 RNU6-50P-201ENST00000362356 103 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RNU5E-1-201ENST00000362477 120 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RNU1-39P-201ENST00000383897 165 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RNU6-754P-201ENST00000391166 107 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 RPL21P111-201ENST00000418453 477 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AL159169.1-201ENST00000421119 127 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC098614.3-201ENST00000438957 440 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AL049734.2-201ENST00000441066 616 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 NUTF2P3-201ENST00000448540 384 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 MTND1P11-201ENST00000456661 876 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RPL21P11-201ENST00000461458 483 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC023194.1-201ENST00000493084 308 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RN7SKP122-201ENST00000515923 296 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RNU6-875P-201ENST00000516488 106 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 RN7SKP83-201ENST00000516512 178 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC104383.1-201ENST00000530297 370 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC123904.2-201ENST00000548059 300 ntBASIC4.41□□□□□ -1.7
USP25Q9UHP3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms