Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.85□□□□□ -1.79
HDAC6Q9UBN7 SNORA50A-202ENST00000629536 136 ntBASIC3.85□□□□□ -1.79
HDAC6Q9UBN7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.85□□□□□ -1.79
HDAC6Q9UBN7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HDAC6Q9UBN7 AC068647.1-201ENST00000489539 2265 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 RNU6-1078P-201ENST00000364522 103 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 DEFB108C-201ENST00000400154 252 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 MRPL42P2-201ENST00000403169 426 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 U3.39-201ENST00000408569 239 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 RPS3AP3-201ENST00000411933 242 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 HMGN1P24-201ENST00000412282 298 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC092447.6-201ENST00000414578 210 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC233728.2-201ENST00000425348 757 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL589823.1-201ENST00000429577 183 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 RPL35AP22-201ENST00000436855 335 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC073614.1-201ENST00000438690 650 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC023598.1-201ENST00000472521 361 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC078918.1-201ENST00000498515 228 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC005921.1-201ENST00000510589 286 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC017037.2-201ENST00000513850 890 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 RN7SKP60-201ENST00000516985 239 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AP004371.1-201ENST00000525240 214 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC060771.1-201ENST00000582031 164 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC009977.1-201ENST00000586015 570 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC010928.3-201ENST00000587712 541 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL606834.2-201ENST00000602954 668 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL136363.2-201ENST00000604173 851 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 NDUFA8P1-201ENST00000605525 367 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC015540.1-201ENST00000615828 501 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC009159.1-201ENST00000618386 642 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC048347.1-201ENST00000624621 427 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 MIR4275-201ENST00000636486 87 ntBASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HDAC6Q9UBN7 AC004925.1-201ENST00000624256 2706 ntBASIC3.84□□□□□ -1.8
HDAC6Q9UBN7 FARSBP1-201ENST00000435808 1778 ntBASIC3.84□□□□□ -1.8
HDAC6Q9UBN7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 RNA5SP189-201ENST00000364920 115 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 MIR634-201ENST00000385208 97 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC096664.2-201ENST00000411843 406 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 SPA17P1-201ENST00000416656 452 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 ZNF885P-201ENST00000420174 1098 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 PGBD4P3-201ENST00000440731 581 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC022616.6-201ENST00000520479 119 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AP000907.2-201ENST00000530827 353 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC137800.2-201ENST00000574375 120 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 HMGN2P28-201ENST00000606102 262 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 MIR6130-201ENST00000619419 109 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC022149.2-201ENST00000621061 203 ntBASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.83□□□□□ -1.8
HDAC6Q9UBN7 AC116096.1-201ENST00000566804 2314 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 AL157700.1-201ENST00000561973 1432 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 Y_RNA.359-201ENST00000365498 102 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RN7SKP111-201ENST00000410349 271 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RNU2-47P-201ENST00000410649 186 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RNU6-248P-201ENST00000410720 107 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RNU6-55P-201ENST00000411092 107 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 RNU6-954P-201ENST00000411355 107 ntBASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.82□□□□□ -1.8
HDAC6Q9UBN7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms