Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 MTND1P15-201ENST00000579262 949 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 UBE2L4-201ENST00000587688 464 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL355812.1-201ENST00000603215 216 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC098614.4-201ENST00000607601 462 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL390240.1-201ENST00000612950 384 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL158801.5-201ENST00000623123 465 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AC079597.1-201ENST00000624306 508 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.05□□□□□ -1.92
NDE1Q9NXR1 AL365440.1-201ENST00000436135 2167 ntBASIC3.05□□□□□ -1.92
NDE1Q9NXR1 TEX21P-201ENST00000447107 1476 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNU6-623P-201ENST00000363143 105 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNU6-297P-201ENST00000384636 107 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNU6-712P-201ENST00000410558 100 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 HMGN1P14-201ENST00000412459 517 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 OR4C10P-201ENST00000434991 931 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC092641.1-201ENST00000440229 772 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 ELOCP23-201ENST00000452014 332 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC021382.1-201ENST00000483523 359 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNA5SP76-201ENST00000516277 87 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNU1-45P-201ENST00000517191 141 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AP003497.1-201ENST00000528472 562 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AP002453.2-201ENST00000533503 320 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 HSPE1P5-201ENST00000561489 272 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 XIAPP1-201ENST00000603162 600 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AC112191.3-201ENST00000604371 277 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 IGHV3-29-201ENST00000604817 344 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 AL391813.2-201ENST00000609113 322 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.04□□□□□ -1.92
NDE1Q9NXR1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NDE1Q9NXR1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 FRG1BP-201ENST00000278882 761 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RNU6-629P-201ENST00000384061 103 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RNU6-348P-201ENST00000384386 107 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RNU6-114P-201ENST00000384704 105 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 SNORA40.3-201ENST00000390964 122 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL138880.1-201ENST00000405824 642 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL031121.1-201ENST00000406553 254 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL359704.1-201ENST00000411586 781 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC078974.1-201ENST00000411597 223 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 CDK8P2-201ENST00000415020 547 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 USP9YP13-201ENST00000417797 480 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 TOMM22P1-201ENST00000418578 312 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 ATP5JP1-201ENST00000431631 322 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RPL22P17-201ENST00000438729 315 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL592447.1-201ENST00000447592 540 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RBMY2UP-201ENST00000453474 324 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 IGKV2-26-201ENST00000518305 343 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC022880.1-201ENST00000534017 973 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 SETP7-201ENST00000552169 453 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 RN7SL703P-201ENST00000578485 302 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 OR4K8P-201ENST00000578842 1048 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC073657.2-201ENST00000605661 303 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC055876.5-201ENST00000605667 259 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC006566.1-201ENST00000608943 513 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms