Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC116618.1-201ENST00000634617 774 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC093831.2-201ENST00000624393 3427 ntBASIC2.9□□□□□ -1.95
HPF1Q9NWY4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.9□□□□□ -1.95
HPF1Q9NWY4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 SNORA48.2-201ENST00000390926 124 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 UBE2FP1-201ENST00000416536 447 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 ISCA1P2-201ENST00000438679 421 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 EEF1A1P39-201ENST00000440791 250 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 USP9YP10-201ENST00000454868 628 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 RPL12P25-201ENST00000455592 494 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC135721.1-201ENST00000497954 479 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 CDC42P4-201ENST00000510507 563 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 RN7SKP272-201ENST00000516988 232 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AP002404.1-201ENST00000532005 451 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 UBL5P2-201ENST00000583788 219 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AL357094.1-201ENST00000603845 844 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 PRELID3BP8-201ENST00000604148 295 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 AC004808.1-201ENST00000627671 721 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 MIR7515-201ENST00000637837 67 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HPF1Q9NWY4 ZNF833P-201ENST00000424938 1494 ntBASIC2.89□□□□□ -1.95
HPF1Q9NWY4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 RNU6-884P-201ENST00000363889 107 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 AC096664.2-201ENST00000411843 406 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 USP9YP33-201ENST00000412220 421 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 MTCYBP38-201ENST00000417160 1123 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 USP9YP35-201ENST00000435696 412 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 AL160314.1-201ENST00000490836 438 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 AC006539.2-201ENST00000601729 572 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 LRRC77P-213ENST00000637727 880 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 MIR622-201ENST00000638396 96 ntBASIC2.88□□□□□ -1.95
HPF1Q9NWY4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HPF1Q9NWY4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 RNU2-49P-201ENST00000410666 184 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 MTATP6P20-201ENST00000414147 562 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 ATP5F1P1-201ENST00000433775 569 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 RN7SL75P-201ENST00000461926 281 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 EIF4EP3-201ENST00000498782 656 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC008716.1-201ENST00000511084 513 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC239868.4-201ENST00000608318 671 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AL591516.1-201ENST00000611326 274 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AP000720.1-201ENST00000625091 483 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
HPF1Q9NWY4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.87□□□□□ -1.95
HPF1Q9NWY4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 RNU1-140P-201ENST00000365040 165 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 TAS2R15P-201ENST00000390674 928 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 ERHP2-201ENST00000402323 299 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 RPL7P25-201ENST00000404151 721 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 CCNG1P1-201ENST00000406783 885 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms