Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORA57.3-201ENST00000411095 141 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 NDUFB4P7-201ENST00000423198 363 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AL356867.1-201ENST00000429623 299 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 NEK4P1-201ENST00000433383 879 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 MTND2P24-201ENST00000453434 806 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 SNORD97-201ENST00000459187 142 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 RPS20P20-201ENST00000460498 340 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 RNU2-10P-201ENST00000516375 211 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC022616.3-201ENST00000523940 148 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AP003392.2-201ENST00000527269 208 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC068790.2-201ENST00000602601 557 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC078795.2-201ENST00000602835 1252 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AL136363.2-201ENST00000604173 851 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AL161734.1-201ENST00000609720 557 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC099842.1-201ENST00000619919 596 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC110801.1-201ENST00000623590 212 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AP000553.6-201ENST00000641242 118 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC6A13Q9NSD5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 HSPE1P11-201ENST00000339579 310 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RNY1P12-201ENST00000364251 105 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 MIR493-201ENST00000385254 89 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 Y_RNA.582-201ENST00000391023 95 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RPL32P23-201ENST00000397237 405 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 U3.42-201ENST00000408746 214 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 BX295541.1-201ENST00000417774 250 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 PIGFP2-201ENST00000421400 651 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL591419.1-201ENST00000427423 339 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC010975.2-201ENST00000427781 588 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RPL31P35-201ENST00000431058 377 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC138853.1-201ENST00000503549 823 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC026784.1-201ENST00000507986 352 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 SLC25A15P5-201ENST00000508033 253 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 ARL2BPP6-201ENST00000512757 439 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 NRON-201ENST00000517270 370 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AP001804.3-201ENST00000525146 880 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 ARL2BPP2-201ENST00000550907 489 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC034105.4-201ENST00000568304 277 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AL391840.1-201ENST00000571144 367 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RN7SL703P-201ENST00000578485 302 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 MIR3167-201ENST00000579623 85 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC084782.3-201ENST00000612282 578 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 FRG1KP-201ENST00000623592 341 ntBASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SLC6A13Q9NSD5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 AC092447.7-201ENST00000422212 1621 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 AC090740.1-201ENST00000623193 2262 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 OR5J1P-201ENST00000313544 939 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 MIR23B-201ENST00000384832 97 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 RNU2-36P-201ENST00000410361 191 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 RN7SKP140-201ENST00000411196 284 ntBASIC3.41□□□□□ -1.86
SLC6A13Q9NSD5 AC017079.2-201ENST00000416102 485 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms