Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AF274854.1-201ENST00000413236 615 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC080125.1-201ENST00000414888 684 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 OR10R1P-201ENST00000441524 1141 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL135938.1-201ENST00000443141 297 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 BX322784.1-201ENST00000455793 1077 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 RNU7-136P-201ENST00000458819 69 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 OR5BM1P-201ENST00000512021 366 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 HMGB1P14-201ENST00000557424 591 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC023813.2-201ENST00000564321 469 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 MIR3921-201ENST00000577308 85 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 MIR4446-201ENST00000578505 67 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 BNIP3P26-201ENST00000600827 554 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL049779.4-201ENST00000604500 156 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL035413.2-201ENST00000604801 525 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC080013.4-201ENST00000607624 649 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL157392.4-201ENST00000609756 345 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL590099.1-201ENST00000615276 138 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL450472.3-201ENST00000615578 367 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AC103798.2-201ENST00000624292 632 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 AL445984.1-201ENST00000637834 659 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.25□□□□□ -2.05
EXOSC4Q9NPD3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 GNG5P1-201ENST00000255500 204 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-413P-201ENST00000384115 107 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AL513475.1-201ENST00000406602 315 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RPS3AP24-201ENST00000407896 734 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RNU2-25P-201ENST00000411041 191 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 TPMTP2-201ENST00000414372 726 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 SDCBPP1-201ENST00000440192 890 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC005410.1-202ENST00000460347 485 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC073901.1-201ENST00000462471 408 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RPL31P41-201ENST00000477967 372 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC011825.1-201ENST00000484967 388 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC114981.1-201ENST00000503897 678 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 VN1R104P-201ENST00000505115 1009 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AL359273.1-201ENST00000510918 627 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 TTC39CP1-201ENST00000512513 755 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC006499.2-201ENST00000513470 337 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RNA5SP282-201ENST00000516355 108 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 CYCSP39-201ENST00000565821 309 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AL512347.1-201ENST00000566420 503 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC103810.1-201ENST00000579873 453 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AL451007.1-201ENST00000595491 289 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC013553.2-201ENST00000604244 589 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC021749.1-201ENST00000604322 607 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC024560.3-201ENST00000608482 349 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 AC131235.4-201ENST00000609288 620 ntBASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.24□□□□□ -2.05
EXOSC4Q9NPD3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RNU6-560P-201ENST00000364007 108 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RNU1-112P-201ENST00000364401 164 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RNU1-138P-201ENST00000384093 164 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 SNORA80E-201ENST00000384744 137 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 MIR491-201ENST00000384877 84 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 U3.20-201ENST00000390909 217 ntBASIC2.23□□□□□ -2.05
EXOSC4Q9NPD3 RPS3AP37-201ENST00000419176 745 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms