Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC138649.5-201ENST00000637456 137 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTA1Q9NP79 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VTA1Q9NP79 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VTA1Q9NP79 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.46□□□□□ -1.69
VTA1Q9NP79 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VTA1Q9NP79 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 BDP1P-201ENST00000582658 1990 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AP004289.2-201ENST00000444413 1457 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 RNA5SP235-201ENST00000365411 114 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 RNY3P14-201ENST00000384309 102 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 U8.11-201ENST00000384699 133 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 U8.12-201ENST00000384701 133 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 RNU6-373P-201ENST00000411247 98 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 U8.18-201ENST00000459285 133 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC023141.12-201ENST00000512399 199 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 SNORD60.2-201ENST00000516883 86 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 RNU6-835P-201ENST00000516974 104 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTA1Q9NP79 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC022968.1-201ENST00000567372 442 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 MIR3944-201ENST00000581277 108 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC010928.3-201ENST00000587712 541 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AL022099.1-201ENST00000604551 712 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AL031666.3-201ENST00000609320 1006 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC025253.1-201ENST00000613623 543 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 YWHAEP7-203ENST00000622054 312 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC110801.1-201ENST00000623590 212 ntBASIC4.46□□□□□ -1.7
VTA1Q9NP79 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.46□□□□□ -1.7
VTA1Q9NP79 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VTA1Q9NP79 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 SNORA7.2-201ENST00000364446 145 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 SNORA70.4-201ENST00000365509 134 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 SNORA69-201ENST00000383895 132 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 RNU6-641P-201ENST00000384006 107 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 MIR1251-201ENST00000408552 70 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 RNU2-9P-201ENST00000410194 145 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 RNA5SP104-201ENST00000410989 118 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 MTCO1P39-201ENST00000426148 480 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 HMGN2P21-201ENST00000447764 270 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 RPL21P11-201ENST00000461458 483 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AL163973.1-201ENST00000484753 577 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 MLLT10P2-201ENST00000506434 249 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 SNORA31.20-201ENST00000517111 133 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC026403.1-201ENST00000518938 295 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 ARL2BPP2-201ENST00000550907 489 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC125611.2-201ENST00000551907 647 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 OR4H12P-201ENST00000556269 907 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 RPL23AP84-201ENST00000571193 464 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.45□□□□□ -1.7
VTA1Q9NP79 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.45□□□□□ -1.7
VTA1Q9NP79 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTA1Q9NP79 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VTA1Q9NP79 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VTA1Q9NP79 AC092326.2-201ENST00000624772 1561 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC009812.4-201ENST00000569134 1805 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VTA1Q9NP79 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 RNA5SP52-201ENST00000362448 134 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 Y_RNA.255-201ENST00000364581 97 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 RNU6-867P-201ENST00000364956 107 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 U1.1-201ENST00000384101 164 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 MIR93-201ENST00000385024 80 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 RNU2-36P-201ENST00000410361 191 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 RAC1P3-201ENST00000416129 580 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 SSXP9-201ENST00000417503 292 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 DUTP6-201ENST00000425573 462 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 MTATP6P4-201ENST00000427725 675 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 AL645939.1-201ENST00000453429 797 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 snoU13.24-201ENST00000458998 104 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 KLHL2P1-201ENST00000508691 521 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 Vault.1-201ENST00000516474 102 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC087369.1-201ENST00000520775 996 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AF235103.2-201ENST00000525753 346 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AP001646.1-201ENST00000527936 915 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms