Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-416P-201ENST00000516265 103 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR892C-201ENST00000516410 77 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 HMGN1P28-201ENST00000521340 364 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 LSM6P2-201ENST00000552208 177 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC104229.1-201ENST00000561364 255 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR3200-201ENST00000580767 85 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR3199-1-201ENST00000582434 88 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC105224.1-201ENST00000587055 421 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC046143.2-201ENST00000609789 160 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC006213.5-201ENST00000619673 288 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC098679.5-201ENST00000624394 571 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC025048.6-202ENST00000627667 438 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 OR8B1P-202ENST00000641132 1178 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VCX3BQ9H321 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 NUP58P1-201ENST00000502546 1738 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR525-201ENST00000384978 85 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 MIR34A-201ENST00000385130 110 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 ATF1P1-201ENST00000406040 927 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 VN1R42P-201ENST00000424651 344 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC093155.1-201ENST00000440164 826 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC092170.1-201ENST00000440211 356 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL358832.1-201ENST00000497800 389 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC006390.1-201ENST00000508068 283 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC093281.2-201ENST00000510153 597 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 RNU6-27P-201ENST00000516146 107 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 SCARNA16.3-201ENST00000516595 184 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 RMST_10.1-201ENST00000616309 154 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC090772.4-201ENST00000623599 362 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC068057.2-201ENST00000624047 895 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 MIR7157-201ENST00000635801 60 ntBASIC1.93□□□□□ -2.1
VCX3BQ9H321 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3BQ9H321 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3BQ9H321 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3BQ9H321 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3BQ9H321 MFSD8-213ENST00000641134 1327 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 ADAM3A-203ENST00000461344 2157 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VCX3BQ9H321 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VCX3BQ9H321 SNORD56.4-201ENST00000363883 71 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 RNU6-1083P-201ENST00000384022 107 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AL355615.1-201ENST00000406187 641 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 HMGB1P49-201ENST00000418882 569 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AL109913.1-201ENST00000421173 514 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC024082.2-201ENST00000434771 238 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 MTCYBP45-201ENST00000435243 565 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VCX3BQ9H321 RNFT1P2-201ENST00000443064 757 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 TPT1P14-201ENST00000448018 505 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 RSL24D1P3-201ENST00000449255 495 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VCX3BQ9H321 PRSS3P4-201ENST00000453323 162 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 PABPC1P3-201ENST00000469174 459 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC114786.4-201ENST00000508771 728 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC114797.1-201ENST00000514003 728 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.92□□□□□ -2.1
VCX3BQ9H321 COX6CP8-201ENST00000522620 226 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC023824.3-201ENST00000569003 562 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.92□□□□□ -2.1
VCX3BQ9H321 ELOCP29-201ENST00000588193 334 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AL020997.3-201ENST00000602843 359 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AL450270.1-201ENST00000606160 391 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC009318.4-201ENST00000620496 486 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 OR1S1-201ENST00000624470 978 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AP003400.5-201ENST00000624827 617 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AL390862.1-201ENST00000635467 1469 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
VCX3BQ9H321 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
VCX3BQ9H321 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VCX3BQ9H321 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 OR5T3-201ENST00000303059 1023 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 RNU1-91P-201ENST00000364746 163 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 RNVU1-14-201ENST00000384770 164 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 MIR325-201ENST00000385260 98 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 U3.26-201ENST00000391236 204 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 OR51A3P-201ENST00000413596 924 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 RPL36AP36-201ENST00000418616 301 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 CYCSP32-201ENST00000440548 321 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms