Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXD1Q9GZZ0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC009902.3-201ENST00000606235 2172 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC092104.1-201ENST00000497346 1441 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-1078P-201ENST00000364522 103 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.359-201ENST00000365498 102 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RPL7P25-201ENST00000404151 721 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC099677.1-201ENST00000420575 175 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL139281.1-201ENST00000422120 335 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL589823.1-201ENST00000429577 183 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 DLGAP5P1-201ENST00000430307 464 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL662791.1-201ENST00000441992 928 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL022238.1-201ENST00000442557 355 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RAC1P7-201ENST00000445367 377 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC093392.2-201ENST00000450682 337 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RPS24P6-201ENST00000452670 400 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC234775.1-201ENST00000454247 670 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 snoU13.24-201ENST00000458998 104 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 SNORA84-201ENST00000459229 133 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RPL21P13-201ENST00000488305 481 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC112204.1-201ENST00000502591 103 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC004062.1-201ENST00000509926 645 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC108043.1-201ENST00000512696 574 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AP000907.2-201ENST00000530827 353 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL133271.1-201ENST00000538229 291 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC018630.1-201ENST00000541376 925 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC123904.2-201ENST00000548059 300 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC103987.3-201ENST00000582071 292 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC064872.1-201ENST00000604823 1072 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC103591.3-201ENST00000608684 209 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AL603839.4-201ENST00000624658 1005 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC004925.1-201ENST00000624256 2706 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 AC103988.1-201ENST00000566382 2177 ntBASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXD1Q9GZZ0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 RNU6-600P-201ENST00000362524 99 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 RNU1-33P-201ENST00000364249 162 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 RNU4-24P-201ENST00000364565 139 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 U8.9-201ENST00000365667 134 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 SNORA40.3-201ENST00000390964 122 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 Y_RNA.598-201ENST00000410480 95 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 HMGN1P24-201ENST00000412282 298 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 HMGN1P14-201ENST00000412459 517 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 EI24P1-201ENST00000416584 867 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC006366.1-201ENST00000422002 759 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 RPL21P112-201ENST00000434403 463 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 TPT1P14-201ENST00000448018 505 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 MTCO2P18-201ENST00000457151 658 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 RPL21P10-201ENST00000463521 490 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC055855.1-201ENST00000489563 579 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 CBX3P3-201ENST00000508108 532 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC022878.1-201ENST00000530684 149 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC109635.4-202ENST00000531666 412 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC135279.1-201ENST00000543493 504 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC125611.2-201ENST00000551907 647 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC024909.2-201ENST00000553035 286 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AL157394.1-201ENST00000562983 1224 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms